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contig_metadata

17 rows where bioproject = "PRJNA1073005" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA1073005 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7839595 7839595 PRJNA1073005_P_NODE_4327_length_477_cov_1.193069_g4208_i0 PRJNA1073005 4327 477 1.193069 5.69093913 Vexillifera expectata 1789827 Discosea other_Eukaryota 634 3.619999999999999e-177   NTclustered gi|1042160925|dbj|LC102269.1| 1789827 g4208 i0 90.737 99.6918238993711 475 44 99 0 1 475 526 52 Vexillifera expectata gene for actin, partial cds, strain: 4730_cl4 blastn 47553 634 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera expectata
7839601 7839601 PRJNA1073005_P_NODE_6347_length_354_cov_1.284698_g6228_i0 PRJNA1073005 6347 354 1.284698 4.54783092 Vannella sp. 1973054 Discosea other_Eukaryota 645 1.2099999999999996e-180   NTclustered gi|2169663314|gb|OL989990.1| 1973054 g6228 i0 99.435 97.7316384180791 354 2 100 0 1 354 1388 1741 Vannella sp. isolate P147 small subunit ribosomal RNA gene, partial sequence blastn 34597 645 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp.
9114579 9114579 PRJNA1073005_P_NODE_2208_length_747_cov_2.316024_g2099_i0 PRJNA1073005 2208 747 2.316024 17.30069928 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 440 6.85e-154   NR XP_004338972.1 1257118 g2099 i0 88.2 2.94377510040161 245 29 98.4 0 13 747 10 254 XP_004338972.1 adenine nucleotide translocator, putative [Acanthamoeba castellanii str. Neff] diamond 2199 440 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12940717 12940717 PRJNA1073005_P_NODE_2851_length_640_cov_9.380952_g2735_i0 PRJNA1073005 2851 640 9.380952 60.0380928 Cochliopodium minus 313997 Discosea other_Eukaryota 809 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g2735 i0 90.358 52.70625 643 25 97 21 1 621 631 4 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 33732 809 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
16763886 16763886 PRJNA1073005_P_NODE_10194_length_242_cov_0.911243_g10075_i0 PRJNA1073005 10194 242 0.911243 2.20520806 Thecamoeba similis 242545 Discosea other_Eukaryota 298 2.54e-76   NTclustered gi|33946350|gb|AY294154.1| 242545 g10075 i0 89.121 91.8512396694215 239 26 99 0 4 242 41 279 Thecamoeba similis actin mRNA, complete cds blastn 22228 298 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis
18038674 18038674 PRJNA1073005_P_NODE_1935_length_802_cov_3.039781_g1836_i0 PRJNA1073005 1935 802 3.039781 24.37904362 Cochliopodium minus 313997 Discosea other_Eukaryota 900 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g1836 i0 87.728 53.5324189526185 823 33 100 35 1 802 2216 1441 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 42933 900 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
19312649 19312649 PRJNA1073005_P_NODE_2576_length_682_cov_4.111658_g2462_i0 PRJNA1073005 2576 682 4.111658 28.04150756 Cochliopodium minus 313997 Discosea other_Eukaryota 745 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g2462 i0 86.364 57.4604105571848 726 43 100 33 1 682 644 1357 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 39188 745 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
19312668 19312668 PRJNA1073005_P_NODE_8716_length_258_cov_1.335135_g8597_i0 PRJNA1073005 8716 258 1.335135 3.4446483 Platyamoeba placida 3454475 Discosea other_Eukaryota 316 7.539999999999998e-82   NTclustered gi|33946348|gb|AY294153.1| 197527 g8597 i0 88.76 98.1976744186046 258 29 100 0 1 258 565 308 Platyamoeba placida actin mRNA, partial cds blastn 25335 316 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
27003965 27003965 PRJNA1073005_P_NODE_9122_length_250_cov_0.870056_g9003_i0 PRJNA1073005 9122 250 0.870056 2.17514 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 43.1 0.0306   NR XP_004336959.1 1257118 g9003 i0 34.8 0.828 69 38 76.8 3 199 8 557 623 XP_004336959.1 uncharacterized protein ACA1_051890 [Acanthamoeba castellanii str. Neff] diamond 207 43.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28015104 28015104 PRJNA1073005_P_NODE_6625_length_340_cov_1.842697_g6506_i0 PRJNA1073005 6625 340 1.842697 6.2651698 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 121 3.4e-30   NR XP_004341586.1 1257118 g6506 i0 52.3 0.961764705882353 109 52 96.2 0 336 10 63 171 XP_004341586.1 elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff] diamond 327 121 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28109527 28109527 PRJNA1073005_P_NODE_10345_length_241_cov_0.916667_g10226_i0 PRJNA1073005 10345 241 0.916667 2.20916747 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 97.8 2.16e-22   NR ADC43782.1 5755 g10226 i0 56.4 2.36514522821577 78 33 97.1 1 241 8 8 84 ADC43782.1 autophagy protein 3 [Acanthamoeba castellanii] diamond 570 97.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29088546 29088546 PRJNA1073005_P_NODE_7868_length_287_cov_1.415888_g7749_i0 PRJNA1073005 7868 287 1.415888 4.06359856 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 172 1.59e-48   NR XP_004338838.1 1257118 g7749 i0 83.2 0.993031358885017 95 16 99.3 0 285 1 201 295 XP_004338838.1 sulfate adenylyltransferase [Acanthamoeba castellanii str. Neff] diamond 285 172 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29332599 29332599 PRJNA1073005_P_NODE_6109_length_366_cov_1.047782_g5990_i0 PRJNA1073005 6109 366 1.047782 3.83488212 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 76.3 9.86e-14   NR XP_004337500.1 1257118 g5990 i0 59.3 0.860655737704918 54 22 44.3 0 204 365 86 139 XP_004337500.1 eukaryotic translation initiation factor 4E family [Acanthamoeba castellanii str. Neff] diamond 315 76.6 0.996083550913838 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30572662 30572662 PRJNA1073005_P_NODE_9573_length_247_cov_0.885057_g9454_i0 PRJNA1073005 9573 247 0.885057 2.18609079 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 63.5 7.77e-10   NR XP_004358266.1 1257118 g9454 i0 52.6 2.01619433198381 57 26 69.2 1 2 172 89 144 XP_004358266.1 uncharacterized protein ACA1_085610, partial [Acanthamoeba castellanii str. Neff] diamond 498 63.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30952239 30952239 PRJNA1073005_P_NODE_10034_length_243_cov_0.905882_g9915_i0 PRJNA1073005 10034 243 0.905882 2.20129326 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 84.3 1.15e-18   NR XP_004353726.1 1257118 g9915 i0 63.8 0.716049382716049 58 21 71.6 0 10 183 24 81 XP_004353726.1 LIM domain containing protein [Acanthamoeba castellanii str. Neff] diamond 174 84.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31015244 31015244 PRJNA1073005_P_NODE_10235_length_242_cov_0.911243_g10116_i0 PRJNA1073005 10235 242 0.911243 2.20520806 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 74.3 2.73e-13   NR XP_004345824.1 1257118 g10116 i0 40 1.95867768595041 80 41 99.2 2 2 241 494 566 XP_004345824.1 uncharacterized protein ACA1_181690 [Acanthamoeba castellanii str. Neff] diamond 474 74.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32470447 32470447 PRJNA1073005_P_NODE_9039_length_251_cov_0.865169_g8920_i0 PRJNA1073005 9039 251 0.865169 2.17157419 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 73.6 4.58e-13   NR XP_004341369.1 1257118 g8920 i0 43.2 0.884462151394422 74 39 84.9 1 213 1 47 120 XP_004341369.1 sphingomyelin phosphodiesterase, putative [Acanthamoeba castellanii str. Neff] diamond 222 73.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;