RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1073005" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1073005 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29530560 29530560 PRJNA1073005_P_NODE_6390_length_352_cov_1.376344_g6271_i0 PRJNA1073005 6390 352 1.376344 4.84473088 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 73.9 2.08e-14   NR XP_028414507.1 151771 g6271 i0 40.2 0.784090909090909 92 55 78.4 0 48 323 6 97 XP_028414507.1 cystatin-B-like [Dendronephthya gigantea] diamond 276 73.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
32366990 32366990 PRJNA1073005_P_NODE_9779_length_245_cov_0.895349_g9660_i0 PRJNA1073005 9779 245 0.895349 2.19360505 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 106 1.71e-24   NR XP_047142339.1 6087 g9660 i0 62.4 10.3714285714286 85 28 99.2 2 2 244 421 505 XP_047142339.1 major vault protein [Hydra vulgaris] diamond 2541 107 0.990654205607477 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;