RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1073005" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1073005 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30343827 30343827 PRJNA1073005_P_NODE_8052_length_281_cov_1.403846_g7933_i0 PRJNA1073005 8052 281 1.403846 3.94480726 Armatimonadota 67819 Bacteria Bacteria 120 1.09e-32   NR MBL8048838.1 2282153 g7933 i0 67.5 7.61209964412811 80 26 85.4 0 240 1 2 81 MBL8048838.1 glycine cleavage system protein GcvH [Chthonomonas sp.] diamond 2139 120 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas sp.
32879985 32879985 PRJNA1073005_P_NODE_7780_length_290_cov_1.419355_g7661_i0 PRJNA1073005 7780 290 1.419355 4.1161295 Armatimonadota bacterium 2033014 Bacteria Bacteria 44.3 0.0184   NR MCS7223815.1 2033014 g7661 i0 37.1 0.724137931034483 70 35 72.4 1 33 242 87 147 MCS7223815.1 HEAT repeat domain-containing protein [Armatimonadota bacterium] diamond 210 44.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;