contig_metadata
10 rows where bioproject = "PRJNA1073005", tax_clade = "PVC group" and tax_kingdom = "Pseudomonadati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7393710 | 7393710 | PRJNA1073005_P_NODE_6706_length_338_cov_0.833962_g6587_i0 | PRJNA1073005 | 6706 | 338 | 0.833962 | 2.81879156 | Planctomycetia | 203683 | Bacteria | Bacteria | 176 | 1.02e-50 | NR | QGJ71590.1 | 2603660 | g6587 | i0 | 78.9 | 23.8934911242604 | 109 | 23 | 96.7 | 0 | 11 | 337 | 1 | 109 | QGJ71590.1 Adenosylhomocysteinase [Planctomycetales bacterium 10988] | diamond | 8076 | 176 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetales bacterium 10988 | |||
| 24412871 | 24412871 | PRJNA1073005_P_NODE_10280_length_241_cov_1.827381_g10161_i0 | PRJNA1073005 | 10280 | 241 | 1.827381 | 4.40398821 | Verrucomicrobiales | 48461 | Bacteria | Bacteria | 126 | 2.66e-32 | NR | MDP3851435.1 | 1962973 | g10161 | i0 | 76.6 | 5.73858921161826 | 77 | 18 | 95.9 | 0 | 5 | 235 | 126 | 202 | MDP3851435.1 trigger factor [Luteolibacter sp.] | diamond | 1383 | 126 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 26963833 | 26963833 | PRJNA1073005_P_NODE_8382_length_270_cov_1.172589_g8263_i0 | PRJNA1073005 | 8382 | 270 | 1.172589 | 3.1659903 | Planctomycetia | 203683 | Bacteria | Bacteria | 49.7 | 1.8e-4 | NR | MFM7518713.1 | 117 | g8263 | i0 | 42 | 3.91111111111111 | 88 | 47 | 96.7 | 2 | 262 | 2 | 243 | 327 | MFM7518713.1 hypothetical protein [Pirellula sp.] | diamond | 1056 | 49.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellula | Pirellula sp. | |
| 26972389 | 26972389 | PRJNA1073005_P_NODE_10182_length_242_cov_0.911243_g10063_i0 | PRJNA1073005 | 10182 | 242 | 0.911243 | 2.20520806 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 42.4 | 0.0441 | NR | NLK41141.1 | 2026780 | g10063 | i0 | 41 | 0.483471074380165 | 39 | 23 | 48.3 | 0 | 6 | 122 | 175 | 213 | NLK41141.1 VanZ family protein [Planctomycetota bacterium] | diamond | 117 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28701246 | 28701246 | PRJNA1073005_P_NODE_9287_length_249_cov_0.875000_g9168_i0 | PRJNA1073005 | 9287 | 249 | 0.875 | 2.17875 | Thalassoglobus | 2795865 | Bacteria | Bacteria | 43.9 | 0.00606 | NR | MCY2989473.1 | 2026780 | g9168 | i0 | 72.7 | 1.85542168674699 | 22 | 6 | 26.5 | 0 | 184 | 249 | 2 | 23 | MCY2989473.1 tryptophan-rich sensory protein [Planctomycetota bacterium] | diamond | 462 | 44.3 | 0.99097065462754 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29372655 | 29372655 | PRJNA1073005_P_NODE_9189_length_249_cov_1.375000_g9070_i0 | PRJNA1073005 | 9189 | 249 | 1.375 | 3.42375 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 41.2 | 0.0434 | NR | MEY2539348.1 | 2026799 | g9070 | i0 | 38.6 | 0.843373493975904 | 70 | 40 | 80.7 | 1 | 249 | 49 | 36 | 105 | MEY2539348.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 210 | 41.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29624740 | 29624740 | PRJNA1073005_P_NODE_8690_length_259_cov_1.263441_g8571_i0 | PRJNA1073005 | 8690 | 259 | 1.263441 | 3.27231219 | Lacunisphaera sp. | 1961806 | Bacteria | Bacteria | 157 | 1e-45 | NR | MSU46788.1 | 1961806 | g8571 | i0 | 89.5 | 1.99227799227799 | 86 | 9 | 99.6 | 0 | 259 | 2 | 163 | 248 | MSU46788.1 rRNA pseudouridine synthase [Lacunisphaera sp.] | diamond | 516 | 157 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera sp. | |
| 29901057 | 29901057 | PRJNA1073005_P_NODE_10191_length_242_cov_0.911243_g10072_i0 | PRJNA1073005 | 10191 | 242 | 0.911243 | 2.20520806 | PVC group | 1783257 | Bacteria | Bacteria | 44.3 | 0.0103 | NR | HNX04094.1 | 2026772 | g10072 | i0 | 30.4 | 6.80578512396694 | 79 | 54 | 97.9 | 1 | 242 | 6 | 335 | 412 | HNX04094.1 ethanolamine permease [Opitutales bacterium] | diamond | 1647 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 30446709 | 30446709 | PRJNA1073005_P_NODE_7933_length_285_cov_1.372642_g7814_i0 | PRJNA1073005 | 7933 | 285 | 1.372642 | 3.9120297 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 58.2 | 2.31e-7 | NR | MDB6024976.1 | 2026801 | g7814 | i0 | 36.3 | 0.957894736842105 | 91 | 54 | 94.7 | 3 | 12 | 281 | 536 | 623 | MDB6024976.1 hypothetical protein [Verrucomicrobiales bacterium] | diamond | 273 | 58.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 32185538 | 32185538 | PRJNA1073005_P_NODE_6258_length_358_cov_1.954386_g6139_i0 | PRJNA1073005 | 6258 | 358 | 1.954386 | 6.99670188 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 185 | 4.22e-53 | NR | MBO7207876.1 | 2212473 | g6139 | i0 | 72.3 | 3.9888268156424602 | 119 | 29 | 99.7 | 1 | 358 | 2 | 321 | 435 | MBO7207876.1 terminase large subunit [Kiritimatiellia bacterium] | diamond | 1428 | 185 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;