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contig_metadata

156 rows where bioproject = "PRJNA1072736" and tax_phylum = "Chordata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chordata · 156 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1072736 · 156 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
186966 186966 PRJNA1072736_S_NODE_2141_length_238_cov_1.497436_g2136_i0 PRJNA1072736 2141 238 1.497436 3.56389768 Eschrichtius robustus 9764 Chordata Chordata 99 2.71e-16   NTclustered gi|2806563811|ref|XR_011071392.1| 9764 g2136 i0 89.024 6.74789915966387 82 6 34 2 158 238 781 702 PREDICTED: Eschrichtius robustus uncharacterized lncRNA (LOC137753132), ncRNA blastn 1606 99 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Eschrichtiidae Eschrichtius Eschrichtius robustus
186967 186967 PRJNA1072736_S_NODE_2201_length_235_cov_1.468750_g2196_i0 PRJNA1072736 2201 235 1.46875 3.4515625 Bos taurus 9913 Chordata Chordata 429 8.33e-116   NTclustered gi|61966459|emb|AJ780930.1| 9913 g2196 i0 99.574 5.05531914893617 235 1 100 0 1 235 119449 119683 Bos taurus gart gene, son gene, donson gene and cryzl1 gene blastn 1188 429 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
186968 186968 PRJNA1072736_S_NODE_3021_length_210_cov_1.604790_g3016_i0 PRJNA1072736 3021 210 1.60479 3.370059 Bos taurus 9913 Chordata Chordata 377 2.68e-100   NTclustered gi|315434291|gb|AC225835.11| 9913 g3016 i0 99.048 13.9714285714286 210 2 100 0 1 210 74058 73849 Bos taurus Y Chr BAC CH240-285C13 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 2934 377 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
186970 186970 PRJNA1072736_S_NODE_4461_length_183_cov_0.985714_g4456_i0 PRJNA1072736 4461 183 0.985714 1.80385662 Pseudorca crassidens 82174 Chordata Chordata 180 6.85e-41   NTclustered gi|2791873729|ref|XR_010936025.1| 82174 g4456 i0 84.783 24.2295081967213 184 22 100 5 1 183 1351 1529 PREDICTED: Pseudorca crassidens uncharacterized lncRNA (LOC137209381), transcript variant X1, ncRNA blastn 4434 180 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Pseudorca Pseudorca crassidens
186971 186971 PRJNA1072736_S_NODE_4721_length_179_cov_1.727941_g4716_i0 PRJNA1072736 4721 179 1.727941 3.09301439 Balaenoptera acutorostrata 9767 Chordata Chordata 152 1.45e-32   NTclustered gi|2526669006|ref|XM_007171567.2| 9767 g4716 i0 83.537 57.3128491620112 164 26 92 1 1 164 3208 3046 PREDICTED: Balaenoptera acutorostrata xyloside xylosyltransferase 1 (XXYLT1), mRNA blastn 10259 152 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Balaenopteridae Balaenoptera Balaenoptera acutorostrata
186972 186972 PRJNA1072736_S_NODE_5181_length_173_cov_2.523077_g5176_i0 PRJNA1072736 5181 173 2.523077 4.36492321 Bos javanicus 9906 Chordata Chordata 193 8.21e-45   NTclustered gi|2633905919|ref|XM_061427832.1| 9906 g5176 i0 87.135 251.537572254335 171 20 98 2 4 173 4725 4556 PREDICTED: Bos javanicus gamma-aminobutyric acid type A receptor subunit rho2 (GABRR2), mRNA blastn 43516 193 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
186973 186973 PRJNA1072736_S_NODE_5541_length_169_cov_2.126984_g5536_i0 PRJNA1072736 5541 169 2.126984 3.59460296 Ovis aries 9940 Chordata Chordata 228 2.179999999999999e-55   NTclustered gi|2607276012|ref|XR_009594942.1| 9940 g5536 i0 90.751 1.02366863905325 173 12 100 2 1 169 1963 1791 PREDICTED: Ovis aries uncharacterized LOC132657167 (LOC132657167), ncRNA blastn 173 228 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
1015767 1015767 PRJNA1072736_S_NODE_2561_length_223_cov_1.044444_g2556_i0 PRJNA1072736 2561 223 1.044444 2.32911012 Artiodactyla 91561 Chordata Chordata 65.8 2.54e-6   NTclustered gi|2871690519|ref|XM_070453505.1| 9874 g2556 i0 95.122 27.9551569506726 41 2 18 0 1 41 192 152 PREDICTED: Odocoileus virginianus peroxisome proliferator activated receptor alpha (PPARA), transcript variant X3, mRNA blastn 6234 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
1015768 1015768 PRJNA1072736_S_NODE_4321_length_185_cov_0.992958_g4316_i0 PRJNA1072736 4321 185 0.992958 1.8369723 Bos 9903 Chordata Chordata 342 8.369999999999999e-90   NTclustered gi|2633691088|ref|XM_061429074.1| 9906 g4316 i0 100 11.9891891891892 185 0 100 0 1 185 10836 10652 PREDICTED: Bos javanicus potassium voltage-gated channel subfamily H member 5 (KCNH5), mRNA blastn 2218 342 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
1461534 1461534 PRJNA1072736_S_NODE_2082_length_240_cov_2.116751_g2077_i0 PRJNA1072736 2082 240 2.116751 5.0802024 Eschrichtius robustus 9764 Chordata Chordata 226 1.1999999999999999e-54   NTclustered gi|2806600505|ref|XM_068546972.1| 9764 g2077 i0 87.129 83.475 202 22 83 2 22 219 2372 2573 PREDICTED: Eschrichtius robustus eva-1 homolog C (EVA1C), transcript variant X2, mRNA blastn 20034 226 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Eschrichtiidae Eschrichtius Eschrichtius robustus
1461536 1461536 PRJNA1072736_S_NODE_2322_length_230_cov_1.807487_g2317_i0 PRJNA1072736 2322 230 1.807487 4.1572201 Bos indicus 9915 Chordata Chordata 248 2.44e-61   NTclustered gi|2878545802|ref|XM_070794752.1| 9915 g2317 i0 97.26 74.3 146 4 63 0 85 230 16268 16123 PREDICTED: Bos indicus calicin (CCIN), mRNA blastn 17089 248 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
1461537 1461537 PRJNA1072736_S_NODE_2742_length_218_cov_1.302857_g2737_i0 PRJNA1072736 2742 218 1.302857 2.84022826 Felis catus 9685 Chordata Chordata 158 3.969999999999999e-34   NTclustered gi|2131052887|ref|XR_006589684.1| 9685 g2737 i0 81.463 0.940366972477064 205 27 92 8 7 207 455 652 PREDICTED: Felis catus uncharacterized LOC123381989 (LOC123381989), ncRNA blastn 205 158 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Felis Felis catus
1461539 1461539 PRJNA1072736_S_NODE_3402_length_201_cov_2.075949_g3397_i0 PRJNA1072736 3402 201 2.075949 4.17265749 Ovis aries 9940 Chordata Chordata 287 4.399999999999999e-73   NTclustered gi|2606970820|ref|XM_027977056.3| 9940 g3397 i0 92.537 3 201 14 100 1 1 201 2954 3153 PREDICTED: Ovis aries peroxisomal biogenesis factor 19 (PEX19), mRNA blastn 603 287 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
2291160 2291160 PRJNA1072736_S_NODE_3842_length_192_cov_3.724832_g3837_i0 PRJNA1072736 3842 192 3.724832 7.15167744 Bos 9903 Chordata Chordata 333 5.269999999999999e-87   NTclustered gi|2633679277|ref|XR_009735251.1| 9906 g3837 i0 97.917 100.411458333333 192 4 100 0 1 192 3636 3827 PREDICTED: Bos javanicus uncharacterized LOC133244008 (LOC133244008), ncRNA blastn 19279 333 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
2737518 2737518 PRJNA1072736_S_NODE_3283_length_204_cov_1.167702_g3278_i0 PRJNA1072736 3283 204 1.167702 2.38211208 Balaenoptera ricei 2746895 Chordata Chordata 108 3.74e-19   NTclustered gi|2586507738|ref|XM_059942765.1| 2746895 g3278 i0 89.412 5.47549019607843 85 9 42 0 49 133 3006 3090 PREDICTED: Balaenoptera ricei two pore channel protein 2-like (LOC132376865), mRNA blastn 1117 108 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Balaenopteridae Balaenoptera Balaenoptera ricei
2737520 2737520 PRJNA1072736_S_NODE_4143_length_188_cov_1.296552_g4138_i0 PRJNA1072736 4143 188 1.296552 2.43751776 Bos javanicus 9906 Chordata Chordata 348 1.84e-91   NTclustered gi|2633694461|ref|XR_009738974.1| 9906 g4138 i0 100 8 188 0 100 0 1 188 6902 6715 PREDICTED: Bos javanicus histamine receptor H2 (HRH2), transcript variant X20, misc_RNA blastn 1504 348 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
2737523 2737523 PRJNA1072736_S_NODE_5783_length_167_cov_1.137097_g5778_i0 PRJNA1072736 5783 167 1.137097 1.89895199 Bos javanicus 9906 Chordata Chordata 292 7.58e-75   NTclustered gi|2633688411|ref|XM_061426032.1| 9906 g5778 i0 99.383 83.0479041916168 162 0 96 1 1 161 1895 1734 PREDICTED: Bos javanicus uromodulin like 1 (UMODL1), mRNA blastn 13869 292 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
2737524 2737524 PRJNA1072736_S_NODE_6543_length_159_cov_1.715517_g6538_i0 PRJNA1072736 6543 159 1.715517 2.72767203 Orcinus orca 9733 Chordata Chordata 161 2.1e-35   NTclustered gi|2280662257|ref|XM_049699989.1| 9733 g6538 i0 87.77 91.3836477987421 139 16 87 1 22 159 7246 7108 PREDICTED: Orcinus orca TELO2 interacting protein 1 (TTI1), transcript variant X5, mRNA blastn 14530 161 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
2737525 2737525 PRJNA1072736_S_NODE_7583_length_151_cov_0.870370_g7578_i0 PRJNA1072736 7583 151 0.87037 1.3142587 Bos indicus 9915 Chordata Chordata 187 3.24e-43   NTclustered gi|2878405208|ref|XM_070768022.1| 9915 g7578 i0 99.038 142.774834437086 104 1 69 0 48 151 7691 7794 PREDICTED: Bos indicus nuclear VCP like (NVL), transcript variant X3, mRNA blastn 21559 187 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
4013405 4013405 PRJNA1072736_S_NODE_1604_length_261_cov_1.509174_g1599_i0 PRJNA1072736 1604 261 1.509174 3.93894414 Bos taurus 9913 Chordata Chordata 427 3.38e-115   NTclustered gi|2587688371|ref|XR_009494892.1| 9913 g1599 i0 96.169 152.574712643678 261 10 100 0 1 261 1509 1769 PREDICTED: Bos taurus uncharacterized lncRNA (LOC132345515), ncRNA blastn 39822 427 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
4013406 4013406 PRJNA1072736_S_NODE_2984_length_211_cov_1.601190_g2979_i0 PRJNA1072736 2984 211 1.60119 3.3785109 Oryx dammah 59534 Chordata Chordata 230 7.979999999999998e-56   NTclustered gi|2009450398|ref|XR_005721542.1| 59534 g2979 i0 88.205 0.924170616113744 195 19 92 2 17 211 780 590 PREDICTED: Oryx dammah uncharacterized LOC120865887 (LOC120865887), ncRNA blastn 195 230 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Oryx Oryx dammah
4013407 4013407 PRJNA1072736_S_NODE_3764_length_194_cov_1.556291_g3759_i0 PRJNA1072736 3764 194 1.556291 3.01920454 Bos indicus 9915 Chordata Chordata 359 8.809999999999999e-95   NTclustered gi|2878344222|ref|XR_011565632.1| 9915 g3759 i0 100 7.63917525773196 194 0 100 0 1 194 2971 2778 PREDICTED: Bos indicus uncharacterized lncRNA (LOC139182046), ncRNA blastn 1482 359 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
4013408 4013408 PRJNA1072736_S_NODE_5784_length_167_cov_1.137097_g5779_i0 PRJNA1072736 5784 167 1.137097 1.89895199 Moschus berezovskii 68408 Chordata Chordata 69.4 1.39e-7   NTclustered gi|2492277092|ref|XM_055400865.1| 68408 g5779 i0 97.561 1.26946107784431 41 0 25 1 120 160 2061 2022 PREDICTED: Moschus berezovskii matrix metallopeptidase 28 (MMP28), mRNA blastn 212 69.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Moschidae Moschus Moschus berezovskii
4843845 4843845 PRJNA1072736_S_NODE_2724_length_218_cov_2.308571_g2719_i0 PRJNA1072736 2724 218 2.308571 5.03268478 root 1 Root_unresolved Root_unresolved 392 1e-104   NTclustered gi|693|emb|V00115.1| 9913 g2719 i0 99.083 11.802752293578 218 2 100 0 1 218 343 560 Bos taurus 1.711a satellite DNA with insert INS-1.711A. (extends from base 501 to 1151) blastn 2573 392 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
5289740 5289740 PRJNA1072736_S_NODE_3025_length_210_cov_1.407186_g3020_i0 PRJNA1072736 3025 210 1.407186 2.9550906 Dama dama 30532 Chordata Chordata 75 3.93e-9   NTclustered gi|2625378866|ref|XM_061150071.1| 30532 g3020 i0 90 19.3904761904762 60 3 27 3 154 210 3107 3166 PREDICTED: Dama dama zinc finger protein 333 (ZNF333), transcript variant X13, mRNA blastn 4072 75 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Dama Dama dama
5289741 5289741 PRJNA1072736_S_NODE_4205_length_187_cov_1.659722_g4200_i0 PRJNA1072736 4205 187 1.659722 3.10368014 Bos taurus 9913 Chordata Chordata 340 3.0499999999999998e-89   NTclustered gi|2587641783|ref|XM_024977807.2| 9913 g4200 i0 99.465 2 187 1 100 0 1 187 8164 8350 PREDICTED: Bos taurus tetratricopeptide repeat domain 28 (TTC28), transcript variant X4, mRNA blastn 374 340 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
5289742 5289742 PRJNA1072736_S_NODE_4565_length_181_cov_2.384058_g4560_i0 PRJNA1072736 4565 181 2.384058 4.31514498 Bos indicus 9915 Chordata Chordata 95.3 2.52e-15   NTclustered gi|2878419009|ref|XR_011561468.1| 9915 g4560 i0 77.073 3.03314917127072 205 22 100 12 1 181 2229 2432 PREDICTED: Bos indicus uncharacterized lncRNA (LOC139177061), ncRNA blastn 549 95.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
5289743 5289743 PRJNA1072736_S_NODE_6185_length_162_cov_2.840336_g6180_i0 PRJNA1072736 6185 162 2.840336 4.60134432 Bos indicus 9915 Chordata Chordata 250 4.45e-62   NTclustered gi|2878409062|ref|XR_011560949.1| 9915 g6180 i0 94.444 1073.48148148148 162 9 100 0 1 162 1188 1027 PREDICTED: Bos indicus uncharacterized lncRNA (LOC109570806), ncRNA blastn 173904 250 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
5289744 5289744 PRJNA1072736_S_NODE_6545_length_159_cov_1.637931_g6540_i0 PRJNA1072736 6545 159 1.637931 2.60431029 Bos taurus 9913 Chordata Chordata 294 1.98e-75   NTclustered gi|2587669645|ref|XR_009492966.1| 9913 g6540 i0 100 1 159 0 100 0 1 159 742 900 PREDICTED: Bos taurus uncharacterized lncRNA (LOC132343941), ncRNA blastn 159 294 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
5289745 5289745 PRJNA1072736_S_NODE_7685_length_150_cov_2.065421_g7680_i0 PRJNA1072736 7685 150 2.065421 3.0981315 Ovis aries 9940 Chordata Chordata 211 1.9e-50   NTclustered gi|2607131233|ref|XR_009599910.1| 9940 g7680 i0 92.667 1 150 5 100 2 1 150 10858 10715 PREDICTED: Ovis aries uncharacterized LOC132659437 (LOC132659437), ncRNA blastn 150 211 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
6118964 6118964 PRJNA1072736_S_NODE_2025_length_242_cov_2.879397_g2020_i0 PRJNA1072736 2025 242 2.879397 6.96814074 Bovidae 9895 Chordata Chordata 409 1.12e-109   NTclustered gi|2633854310|ref|XR_009735960.1| 9906 g2020 i0 97.119 1222.88429752066 243 6 100 1 1 242 4619 4861 PREDICTED: Bos javanicus uncharacterized LOC133246234 (LOC133246234), ncRNA blastn 295938 411 0.995133819951338 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
6118970 6118970 PRJNA1072736_S_NODE_7425_length_152_cov_1.293578_g7420_i0 PRJNA1072736 7425 152 1.293578 1.96623856 Artiodactyla 91561 Chordata Chordata 87.9 3.41e-13   NTclustered gi|2597758476|ref|XM_060302220.1| 9731 g7420 i0 94.643 20.3092105263158 56 3 37 0 45 100 2470 2415 PREDICTED: Globicephala melas RNA binding motif protein 45 (RBM45), transcript variant X1, mRNA blastn 3087 87.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Globicephala Globicephala melas
6564927 6564927 PRJNA1072736_S_NODE_1446_length_270_cov_1.488987_g1441_i0 PRJNA1072736 1446 270 1.488987 4.0202649 Bos indicus 9915 Chordata Chordata 156 1.83e-33   NTclustered gi|2878378073|ref|XM_070800215.1| 9915 g1441 i0 83.721 56.7074074074074 172 20 61 4 7 171 8545 8375 PREDICTED: Bos indicus katanin catalytic subunit A1 like 1 (KATNAL1), transcript variant X2, mRNA blastn 15311 156 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
6564928 6564928 PRJNA1072736_S_NODE_1486_length_268_cov_1.475556_g1481_i0 PRJNA1072736 1486 268 1.475556 3.95449008 Ovis aries 9940 Chordata Chordata 385 2.13e-102   NTclustered gi|2607056646|ref|XM_060410863.1| 9940 g1481 i0 92.537 13.6679104477612 268 20 100 0 1 268 3403 3136 PREDICTED: Ovis aries solute carrier family 28 member 3 (SLC28A3), transcript variant X2, mRNA blastn 3663 385 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
6564931 6564931 PRJNA1072736_S_NODE_7146_length_154_cov_1.693694_g7141_i0 PRJNA1072736 7146 154 1.693694 2.60828876 Pseudorca crassidens 82174 Chordata Chordata 60.2 7.55e-5   NTclustered gi|1481050975|dbj|AB989434.1| 82174 g7141 i0 92.683 1.74025974025974 41 3 27 0 112 152 866282 866242 Pseudorca crassidens genes for major histocompatibility complex extended class I, class I and class III sub-region, complete cds blastn 268 60.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Pseudorca Pseudorca crassidens
6564932 6564932 PRJNA1072736_S_NODE_7566_length_151_cov_1.194444_g7561_i0 PRJNA1072736 7566 151 1.194444 1.80361044 Balaenoptera acutorostrata 9767 Chordata Chordata 152 1.18e-32   NTclustered gi|2526653058|ref|XM_007195983.3| 9767 g7561 i0 88.189 95.2582781456954 127 15 84 0 25 151 2673 2547 PREDICTED: Balaenoptera acutorostrata microfibril associated protein 1 (MFAP1), mRNA blastn 14384 152 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Balaenopteridae Balaenoptera Balaenoptera acutorostrata
7839581 7839581 PRJNA1072736_S_NODE_4507_length_182_cov_1.690647_g4502_i0 PRJNA1072736 4507 182 1.690647 3.07697754 Bos taurus 9913 Chordata Chordata 84.2 5.49e-12   NTclustered gi|2587918737|tpg|BK064707.1| 9913 g4502 i0 96.078 28.3351648351648 51 2 28 0 1 51 3173189 3173139 TPA: Bos taurus breed Hereford TRA/TRD locus blastn 5157 84.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
7839582 7839582 PRJNA1072736_S_NODE_5067_length_175_cov_1.068182_g5062_i0 PRJNA1072736 5067 175 1.068182 1.8693185 Odocoileus virginianus 9874 Chordata Chordata 217 4.94e-52   NTclustered gi|2871648986|ref|XR_011489935.1| 9874 g5062 i0 88.77 1.06857142857143 187 8 100 7 1 175 3047 2862 PREDICTED: Odocoileus virginianus uncharacterized lncRNA (LOC139037115), ncRNA blastn 187 217 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
7839584 7839584 PRJNA1072736_S_NODE_7147_length_154_cov_1.693694_g7142_i0 PRJNA1072736 7147 154 1.693694 2.60828876 Bos taurus 9913 Chordata Chordata 69.4 1.25e-7   NTclustered gi|2587667905|ref|XR_001495063.3| 9913 g7142 i0 93.478 10.8766233766234 46 3 30 0 97 142 19000 18955 PREDICTED: Bos taurus uncharacterized lncRNA (LOC107131810), ncRNA blastn 1675 69.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
7839585 7839585 PRJNA1072736_S_NODE_7567_length_151_cov_1.166667_g7562_i0 PRJNA1072736 7567 151 1.166667 1.76166717 Bos indicus x Bos taurus 30522 Chordata Chordata 154 3.28e-33   NTclustered gi|1542902000|ref|XM_027517271.1| 30522 g7562 i0 86.713 180.64238410596 143 14 94 2 4 145 1799 1661 PREDICTED: Bos indicus x Bos taurus mediator complex subunit 31 (MED31), mRNA blastn 27277 154 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus x Bos taurus
8669007 8669007 PRJNA1072736_S_NODE_1447_length_270_cov_1.392070_g1442_i0 PRJNA1072736 1447 270 1.39207 3.758589 Bovidae 9895 Chordata Chordata 174 5.06e-39   NTclustered gi|2587629667|ref|XM_059892165.1| 9913 g1442 i0 92 118.596296296296 125 8 46 2 140 262 14750 14626 PREDICTED: Bos taurus NEDD4 binding protein 2 like 2 (N4BP2L2), transcript variant X2, mRNA blastn 32021 174 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
8669013 8669013 PRJNA1072736_S_NODE_5907_length_165_cov_2.459016_g5902_i0 PRJNA1072736 5907 165 2.459016 4.0573764 Artiodactyla 91561 Chordata Chordata 89.8 1.05e-13   NTclustered gi|2280729500|ref|XR_004483224.2| 9733 g5902 i0 80.87 10.1575757575758 115 21 70 1 43 157 564 451 PREDICTED: Orcinus orca gastrin releasing peptide receptor (GRPR), transcript variant X2, misc_RNA blastn 1676 89.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
9114565 9114565 PRJNA1072736_S_NODE_1908_length_247_cov_1.700980_g1903_i0 PRJNA1072736 1908 247 1.70098 4.2014206 Eschrichtius robustus 9764 Chordata Chordata 191 4.53e-44   NTclustered gi|2806521685|ref|XM_068553905.1| 9764 g1903 i0 82.432 90.0364372469636 222 35 89 2 9 227 7259 7039 PREDICTED: Eschrichtius robustus DENN domain containing 4A (DENND4A), transcript variant X2, mRNA blastn 22239 191 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Eschrichtiidae Eschrichtius Eschrichtius robustus
9114566 9114566 PRJNA1072736_S_NODE_2588_length_222_cov_2.508380_g2583_i0 PRJNA1072736 2588 222 2.50838 5.5686036 Mus musculus 10090 Chordata Chordata 54.7 0.005   NTclustered gi|71533340|gb|AC156162.2| 10090 g2583 i0 100 0.130630630630631 29 0 13 0 80 108 100755 100783 Mus musculus BAC clone RP24-342A17 from chromosome 9, complete sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
9114568 9114568 PRJNA1072736_S_NODE_4248_length_186_cov_2.916084_g4243_i0 PRJNA1072736 4248 186 2.916084 5.42391624 Bos javanicus 9906 Chordata Chordata 305 1.11e-78   NTclustered gi|2633715015|ref|XM_061435770.1| 9906 g4243 i0 96.237 261.870967741935 186 7 100 0 1 186 4771 4586 PREDICTED: Bos javanicus 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (PFKFB3), transcript variant X10, mRNA blastn 48708 305 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
9114569 9114569 PRJNA1072736_S_NODE_4588_length_181_cov_1.268116_g4583_i0 PRJNA1072736 4588 181 1.268116 2.29528996 Bos javanicus 9906 Chordata Chordata 335 1.36e-87   NTclustered gi|2633884562|ref|XM_061422440.1| 9906 g4583 i0 100 66.5966850828729 181 0 100 0 1 181 464 644 PREDICTED: Bos javanicus CD70 molecule (CD70), mRNA blastn 12054 335 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
9114570 9114570 PRJNA1072736_S_NODE_5388_length_171_cov_1.437500_g5383_i0 PRJNA1072736 5388 171 1.4375 2.458125 Moschus berezovskii 68408 Chordata Chordata 69.4 1.42e-7   NTclustered gi|2492333756|ref|XR_008686482.1| 68408 g5383 i0 100 20.6959064327485 37 0 22 0 135 171 5085 5049 PREDICTED: Moschus berezovskii uncharacterized LOC129559216 (LOC129559216), ncRNA blastn 3539 69.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Moschidae Moschus Moschus berezovskii
9114571 9114571 PRJNA1072736_S_NODE_7028_length_155_cov_1.589286_g7023_i0 PRJNA1072736 7028 155 1.589286 2.4633933 Globicephala melas 9731 Chordata Chordata 106 9.64e-19   NTclustered gi|2862347759|ref|XR_011377408.1| 9731 g7023 i0 85.577 5.55483870967742 104 12 65 2 35 135 2842 2945 PREDICTED: Globicephala melas zinc finger protein 691 (ZNF691), transcript variant X1, misc_RNA blastn 861 106 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Globicephala Globicephala melas
9943965 9943965 PRJNA1072736_S_NODE_1208_length_286_cov_1.160494_g1203_i0 PRJNA1072736 1208 286 1.160494 3.31901284 Bovidae 9895 Chordata Chordata 104 7.19e-18   NTclustered gi|2633784077|ref|XM_061392430.1| 9906 g1203 i0 85.714 26.6153846153846 98 14 34 0 35 132 828 731 PREDICTED: Bos javanicus crystallin beta-gamma domain containing 2 (CRYBG2), transcript variant X2, mRNA blastn 7612 104 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
10390253 10390253 PRJNA1072736_S_NODE_1409_length_273_cov_1.686957_g1404_i0 PRJNA1072736 1409 273 1.686957 4.60539261 Nannospalax galili 1026970 Chordata Chordata 54.7 0.007   NTclustered gi|1691687808|ref|XR_003850796.1| 1026970 g1404 i0 96.875 0.234432234432234 32 1 12 0 236 267 464 495 PREDICTED: Nannospalax galili uncharacterized LOC103740580 (LOC103740580), transcript variant X1, ncRNA blastn 64 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Spalacidae Nannospalax Nannospalax galili
10390254 10390254 PRJNA1072736_S_NODE_2529_length_224_cov_1.756906_g2524_i0 PRJNA1072736 2529 224 1.756906 3.93546944 Balaenoptera ricei 2746895 Chordata Chordata 204 5.19e-48   NTclustered gi|2586594481|ref|XR_009500084.1| 2746895 g2524 i0 83.772 37.3660714285714 228 24 100 9 1 224 1300 1082 PREDICTED: Balaenoptera ricei uncharacterized LOC132356810 (LOC132356810), transcript variant X3, ncRNA blastn 8370 204 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Balaenopteridae Balaenoptera Balaenoptera ricei
10390255 10390255 PRJNA1072736_S_NODE_3889_length_192_cov_1.261745_g3884_i0 PRJNA1072736 3889 192 1.261745 2.4225504 Bubalus kerabau 3119969 Chordata Chordata 303 4.13e-78   NTclustered gi|2496487791|ref|XR_008714253.1| 3119969 g3884 i0 95.312 1 192 8 100 1 1 192 676 866 PREDICTED: Bubalus kerabau uncharacterized LOC129651627 (LOC129651627), ncRNA blastn 192 303 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau
10390256 10390256 PRJNA1072736_S_NODE_6469_length_160_cov_1.205128_g6464_i0 PRJNA1072736 6469 160 1.205128 1.9282048 Dama dama 30532 Chordata Chordata 69.4 1.32e-7   NTclustered gi|2625370642|ref|XR_009693385.1| 30532 g6464 i0 93.617 28.98125 47 1 29 2 115 160 3705 3750 PREDICTED: Dama dama uncharacterized LOC133058796 (LOC133058796), transcript variant X6, ncRNA blastn 4637 69.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Dama Dama dama
10390257 10390257 PRJNA1072736_S_NODE_6749_length_157_cov_2.061404_g6744_i0 PRJNA1072736 6749 157 2.061404 3.23640428 Ovis aries 9940 Chordata Chordata 257 2.5600000000000003e-64   NTclustered gi|2607047196|ref|XM_042242914.2| 9940 g6744 i0 96.178 1 157 6 100 0 1 157 730 886 PREDICTED: Ovis aries erythrocyte membrane protein band 4.1 like 4B (EPB41L4B), transcript variant X11, mRNA blastn 157 257 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
10390258 10390258 PRJNA1072736_S_NODE_7049_length_155_cov_1.258929_g7044_i0 PRJNA1072736 7049 155 1.258929 1.95133995 Orcinus orca 9733 Chordata Chordata 141 2.64e-29   NTclustered gi|2280727007|ref|XR_007479368.1| 9733 g7044 i0 83.871 69.9806451612903 155 18 97 6 3 152 1873 2025 PREDICTED: Orcinus orca uncharacterized LOC125965469 (LOC125965469), ncRNA blastn 10847 141 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
10390259 10390259 PRJNA1072736_S_NODE_7249_length_153_cov_2.136364_g7244_i0 PRJNA1072736 7249 153 2.136364 3.26863692 Ovis aries 9940 Chordata Chordata 122 9.419999999999999e-24   NTclustered gi|2606969254|ref|XR_006057774.2| 9940 g7244 i0 96 0.490196078431373 75 3 49 0 79 153 720 646 PREDICTED: Ovis aries uncharacterized LOC121817731 (LOC121817731), ncRNA blastn 75 122 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
10390260 10390260 PRJNA1072736_S_NODE_7549_length_151_cov_1.379630_g7544_i0 PRJNA1072736 7549 151 1.37963 2.0832413 Ovis canadensis 37174 Chordata Chordata 202 1.1599999999999999e-47   NTclustered gi|2841409146|ref|XR_011258398.1| 37174 g7544 i0 91.216 23.2582781456954 148 13 98 0 1 148 1459 1312 PREDICTED: Ovis canadensis uncharacterized lncRNA (LOC138444100), ncRNA blastn 3512 202 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis canadensis
11219225 11219225 PRJNA1072736_S_NODE_1569_length_263_cov_2.600000_g1564_i0 PRJNA1072736 1569 263 2.6 6.838 Bos 9903 Chordata Chordata 486 5.5499999999999986e-133   NTclustered gi|2878500120|ref|XM_019953814.2| 9915 g1564 i0 100 51.4866920152091 263 0 100 0 1 263 4867 4605 PREDICTED: Bos indicus eukaryotic translation initiation factor 4E binding protein 2 (EIF4EBP2), mRNA blastn 13541 486 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
11219230 11219230 PRJNA1072736_S_NODE_349_length_419_cov_4.704787_g344_i0 PRJNA1072736 349 419 4.704787 19.71305753 Bos 9903 Chordata Chordata 608 1.909999999999999e-169   NTclustered gi|2633679555|ref|XR_009735293.1| 9906 g344 i0 94.43 475.534606205251 395 22 94 0 1 395 946 1340 PREDICTED: Bos javanicus uncharacterized LOC133244066 (LOC133244066), ncRNA blastn 199249 608 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
11219231 11219231 PRJNA1072736_S_NODE_3589_length_197_cov_1.746753_g3584_i0 PRJNA1072736 3589 197 1.746753 3.44110341 Artiodactyla 91561 Chordata Chordata 167 5.839999999999999e-37   NTclustered gi|2746006205|ref|XR_010658844.1| 9886 g3584 i0 88.112 76.4467005076142 143 14 72 2 56 197 2095 1955 PREDICTED: Muntiacus reevesi uncharacterized lncRNA (LOC136145737), transcript variant X2, ncRNA blastn 15060 167 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Muntiacus Muntiacus reevesi
11665616 11665616 PRJNA1072736_S_NODE_2430_length_227_cov_1.342391_g2425_i0 PRJNA1072736 2430 227 1.342391 3.04722757 Bos taurus 9913 Chordata Chordata 294 3.04e-75   NTclustered gi|2587692641|ref|XR_009495349.1| 9913 g2425 i0 95.187 153.506607929515 187 8 82 1 42 227 1386 1200 PREDICTED: Bos taurus uncharacterized lncRNA (LOC112447488), ncRNA blastn 34846 294 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
11665617 11665617 PRJNA1072736_S_NODE_3170_length_206_cov_2.018405_g3165_i0 PRJNA1072736 3170 206 2.018405 4.1579143 Ovis aries 9940 Chordata Chordata 91.6 3.82e-14   NTclustered gi|2607254125|ref|XM_060416676.1| 9940 g3165 i0 89.041 0.354368932038835 73 8 35 0 134 206 6062 5990 PREDICTED: Ovis aries ATP binding cassette subfamily G member 2 (Junior blood group) (ABCG2), transcript variant X10, mRNA blastn 73 91.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
11665618 11665618 PRJNA1072736_S_NODE_4450_length_183_cov_1.342857_g4445_i0 PRJNA1072736 4450 183 1.342857 2.45742831 Ovis aries 9940 Chordata Chordata 187 4.0899999999999985e-43   NTclustered gi|2607037609|ref|XR_009596760.1| 9940 g4445 i0 85.052 3.18032786885246 194 18 100 5 1 183 16364 16557 PREDICTED: Ovis aries uncharacterized LOC132657946 (LOC132657946), transcript variant X2, ncRNA blastn 582 187 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
11665621 11665621 PRJNA1072736_S_NODE_7710_length_150_cov_1.448598_g7705_i0 PRJNA1072736 7710 150 1.448598 2.172897 Ovis aries 9940 Chordata Chordata 233 4.07e-57   NTclustered gi|2606972620|ref|XM_060417178.1| 9940 g7705 i0 94.667 4 150 8 100 0 1 150 6052 6201 PREDICTED: Ovis aries BBX high mobility group box domain containing (BBX), transcript variant X16, mRNA blastn 600 233 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
12494669 12494669 PRJNA1072736_S_NODE_3490_length_199_cov_1.275641_g3485_i0 PRJNA1072736 3490 199 1.275641 2.53852559 Bovidae 9895 Chordata Chordata 93.5 1.02e-14   NTclustered gi|2587678666|ref|XR_009493989.1| 9913 g3485 i0 89.189 13.8693467336683 74 8 37 0 123 196 2609 2536 PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344914), ncRNA blastn 2760 93.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
12494671 12494671 PRJNA1072736_S_NODE_5770_length_167_cov_1.516129_g5765_i0 PRJNA1072736 5770 167 1.516129 2.53193543 Bos 9903 Chordata Chordata 137 3.76e-28   NTclustered gi|2878415226|ref|XR_011561234.1| 9915 g5765 i0 94.382 54.0958083832335 89 5 53 0 77 165 1423 1511 PREDICTED: Bos indicus uncharacterized lncRNA (LOC109570958), ncRNA blastn 9034 137 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
12494672 12494672 PRJNA1072736_S_NODE_6630_length_158_cov_2.539130_g6625_i0 PRJNA1072736 6630 158 2.53913 4.0118254 Artiodactyla 91561 Chordata Chordata 84.2 4.63e-12   NTclustered gi|2280684640|ref|XR_007476026.1| 9733 g6625 i0 90.476 3.91772151898734 63 6 40 0 96 158 7757 7819 PREDICTED: Orcinus orca uncharacterized LOC125963676 (LOC125963676), transcript variant X2, ncRNA blastn 619 84.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
12940704 12940704 PRJNA1072736_S_NODE_2031_length_242_cov_1.989950_g2026_i0 PRJNA1072736 2031 242 1.98995 4.815679 Bos taurus 9913 Chordata Chordata 139 1.63e-28   NTclustered gi|226510600|gb|AC149679.4| 9913 g2026 i0 86.719 52.6528925619835 128 13 51 1 119 242 192734 192861 Bos taurus BAC CH240-27A8 (Children's Hospital Oakland Research Institute Bovine BAC Library complete sequence blastn 12742 139 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
12940707 12940707 PRJNA1072736_S_NODE_3371_length_202_cov_0.886792_g3366_i0 PRJNA1072736 3371 202 0.886792 1.79131984 Bos indicus 9915 Chordata Chordata 368 1.54e-97   NTclustered gi|2878427130|ref|XM_070772029.1| 9915 g3366 i0 99.505 1 202 1 100 0 1 202 2144 1943 PREDICTED: Bos indicus zinc finger protein 568 (ZNF568), transcript variant X1, mRNA blastn 202 368 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
12940709 12940709 PRJNA1072736_S_NODE_3991_length_190_cov_3.768707_g3986_i0 PRJNA1072736 3991 190 3.768707 7.1605433 Orcinus orca 9733 Chordata Chordata 117 5.71e-22   NTclustered gi|2280623844|ref|XR_004482213.2| 9733 g3986 i0 84.298 7.27368421052632 121 17 63 2 64 183 2383 2264 PREDICTED: Orcinus orca uncharacterized LOC105747894 (LOC105747894), ncRNA blastn 1382 117 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
12940710 12940710 PRJNA1072736_S_NODE_5251_length_172_cov_3.387597_g5246_i0 PRJNA1072736 5251 172 3.387597 5.82666684 Bos taurus 9913 Chordata Chordata 302 1.3e-77   NTclustered gi|2587918737|tpg|BK064707.1| 9913 g5246 i0 98.256 176.023255813953 172 3 100 0 1 172 514402 514573 TPA: Bos taurus breed Hereford TRA/TRD locus blastn 30276 302 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
12940711 12940711 PRJNA1072736_S_NODE_5471_length_170_cov_1.283465_g5466_i0 PRJNA1072736 5471 170 1.283465 2.1818905 Bos taurus 9913 Chordata Chordata 309 7.64e-80   NTclustered gi|445065096|emb|FO393397.2| 9913 g5466 i0 99.412 62.5882352941176 170 1 100 0 1 170 105236 105067 B.taurus DNA sequence from clone CH240-405I18, complete sequence blastn 10640 309 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
12940712 12940712 PRJNA1072736_S_NODE_6531_length_159_cov_2.025862_g6526_i0 PRJNA1072736 6531 159 2.025862 3.22112058 Ovis canadensis 37174 Chordata Chordata 171 3.479999999999999e-38   NTclustered gi|2841439112|ref|XM_069550261.1| 37174 g6526 i0 86.076 42.3333333333333 158 22 99 0 1 158 926 769 PREDICTED: Ovis canadensis haptoglobin (LOC138418669), transcript variant X4, mRNA blastn 6731 171 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis canadensis
12940713 12940713 PRJNA1072736_S_NODE_7731_length_150_cov_1.308411_g7726_i0 PRJNA1072736 7731 150 1.308411 1.9626165 Bos indicus x Bos taurus 30522 Chordata Chordata 267 4.009999999999999e-67   NTclustered gi|1542927611|ref|XR_003508697.1| 30522 g7726 i0 98.667 6.52 150 2 100 0 1 150 162 311 PREDICTED: Bos indicus x Bos taurus uncharacterized LOC113883640 (LOC113883640), ncRNA blastn 978 267 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus x Bos taurus
13769155 13769155 PRJNA1072736_S_NODE_2831_length_215_cov_2.290698_g2826_i0 PRJNA1072736 2831 215 2.290698 4.9250007 Bos 9903 Chordata Chordata 387 4.57e-103   NTclustered gi|2633714386|ref|XM_061435545.1| 9906 g2826 i0 99.07 213.753488372093 215 2 100 0 1 215 922 708 PREDICTED: Bos javanicus LINE1 type transposase domain containing 1 (L1TD1), mRNA blastn 45957 387 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
13769156 13769156 PRJNA1072736_S_NODE_3211_length_205_cov_3.160494_g3206_i0 PRJNA1072736 3211 205 3.160494 6.4790127 Bovidae 9895 Chordata Chordata 322 1.24e-83   NTclustered gi|2878349372|ref|XM_070790051.1| 9915 g3206 i0 95.122 542.560975609756 205 9 100 1 1 205 3882 3679 PREDICTED: Bos indicus histone H2B 1/2-like (LOC109562705), transcript variant X1, mRNA blastn 111225 324 0.993827160493827 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
13769157 13769157 PRJNA1072736_S_NODE_3531_length_198_cov_1.212903_g3526_i0 PRJNA1072736 3531 198 1.212903 2.40154794 Delphinidae 9726 Chordata Chordata 76.8 1.02e-9   NTclustered gi|2597672555|ref|XR_009562814.1| 9731 g3526 i0 91.228 2.09090909090909 57 4 28 1 2 57 1628 1572 PREDICTED: Globicephala melas uncharacterized lncRNA (LOC132596797), transcript variant X2, ncRNA blastn 414 76.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Globicephala Globicephala melas
14215639 14215639 PRJNA1072736_S_NODE_1792_length_252_cov_1.995215_g1787_i0 PRJNA1072736 1792 252 1.995215 5.0279418 Bos mutus 72004 Chordata Chordata 189 1.6699999999999999e-43   NTclustered gi|2868752446|ref|XM_070380761.1| 72004 g1787 i0 87.135 65.2222222222222 171 17 67 4 85 252 208 40 PREDICTED: Bos mutus protein-lysine methyltransferase METTL21E (LOC102287829), transcript variant X3, mRNA blastn 16436 189 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
14215641 14215641 PRJNA1072736_S_NODE_3472_length_199_cov_2.935897_g3467_i0 PRJNA1072736 3472 199 2.935897 5.84243503 Bison bison 9901 Chordata Chordata 368 1.51e-97   NTclustered gi|742158603|ref|XM_010848290.1| 43346 g3467 i0 100 23.8391959798995 199 0 100 0 1 199 256 454 PREDICTED: Bison bison bison protein phosphatase 3, catalytic subunit, alpha isozyme (PPP3CA), mRNA blastn 4744 368 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bison Bison bison
14215642 14215642 PRJNA1072736_S_NODE_4432_length_183_cov_1.950000_g4427_i0 PRJNA1072736 4432 183 1.95 3.5685 Orcinus orca 9733 Chordata Chordata 185 1.47e-42   NTclustered gi|2280607261|ref|XM_033422556.2| 9733 g4427 i0 86.982 42.5191256830601 169 17 90 4 16 180 775 608 PREDICTED: Orcinus orca non-compact myelin associated protein (NCMAP), transcript variant X3, mRNA blastn 7781 185 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
14215643 14215643 PRJNA1072736_S_NODE_6752_length_157_cov_2.061404_g6747_i0 PRJNA1072736 6752 157 2.061404 3.23640428 Odocoileus virginianus 9874 Chordata Chordata 135 1.25e-27   NTclustered gi|2871653398|ref|XM_020915283.2| 9874 g6747 i0 93.407 57.3248407643312 91 6 58 0 67 157 9266 9176 PREDICTED: Odocoileus virginianus kinesin-like protein KIF28P (LOC110151847), mRNA blastn 9000 135 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
15489592 15489592 PRJNA1072736_S_NODE_3093_length_208_cov_1.915152_g3088_i0 PRJNA1072736 3093 208 1.915152 3.98351616 Ovis aries 9940 Chordata Chordata 318 1.63e-82   NTclustered gi|2606991928|ref|XM_060394670.1| 9940 g3088 i0 94.231 346.423076923077 208 12 100 0 1 208 1164 1371 PREDICTED: Ovis aries cytochrome b-561 (CYB561), transcript variant X8, mRNA blastn 72056 318 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
15489593 15489593 PRJNA1072736_S_NODE_3393_length_201_cov_2.854430_g3388_i0 PRJNA1072736 3393 201 2.85443 5.7374043 Bos taurus 9913 Chordata Chordata 309 9.39e-80   NTclustered gi|2587918737|tpg|BK064707.1| 9913 g3388 i0 94.527 12.865671641791 201 10 100 1 1 201 239355 239554 TPA: Bos taurus breed Hereford TRA/TRD locus blastn 2586 309 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
15489594 15489594 PRJNA1072736_S_NODE_4373_length_184_cov_1.602837_g4368_i0 PRJNA1072736 4373 184 1.602837 2.94922008 Bos taurus 9913 Chordata Chordata 292 8.490000000000001e-75   NTclustered gi|2587618369|ref|XR_009493768.1| 9913 g4368 i0 95.604 0.989130434782609 182 8 99 0 3 184 1318 1137 PREDICTED: Bos taurus uncharacterized lncRNA (LOC101909825), transcript variant X1, ncRNA blastn 182 292 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
15489596 15489596 PRJNA1072736_S_NODE_5393_length_171_cov_1.101562_g5388_i0 PRJNA1072736 5393 171 1.101562 1.88367102 Bos taurus 9913 Chordata Chordata 316 4.6e-82   NTclustered gi|285026537|gb|AC233219.4| 9913 g5388 i0 100 105 171 0 100 0 1 171 13679 13509 Bos taurus Y Chr BAC CH240-288O15 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 17955 316 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
16318299 16318299 PRJNA1072736_S_NODE_1713_length_256_cov_1.258216_g1708_i0 PRJNA1072736 1713 256 1.258216 3.22103296 Bos 9903 Chordata Chordata 468 1.95e-127   NTclustered gi|2587668544|ref|XM_059881690.1| 9913 g1708 i0 99.609 16 256 1 100 0 1 256 9320 9575 PREDICTED: Bos taurus beta-glucuronidase-like (LOC101904377), mRNA blastn 4096 468 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
16318304 16318304 PRJNA1072736_S_NODE_4193_length_187_cov_2.284722_g4188_i0 PRJNA1072736 4193 187 2.284722 4.27243014 Artiodactyla 91561 Chordata Chordata 76.8 9.5e-10   NTclustered gi|2487045313|ref|XM_028500126.2| 9755 g4188 i0 97.727 21.0641711229947 44 1 24 0 129 172 2664 2707 PREDICTED: Physeter macrocephalus family with sequence similarity 200 member A (FAM200A), transcript variant X1, mRNA blastn 3939 76.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Physeteridae Physeter Physeter macrocephalus
16318306 16318306 PRJNA1072736_S_NODE_5533_length_169_cov_2.523810_g5528_i0 PRJNA1072736 5533 169 2.52381 4.2652389 Bovidae 9895 Chordata Chordata 228 2.179999999999999e-55   NTclustered gi|2633709848|ref|XM_061434349.1| 9906 g5528 i0 99.213 50.0295857988166 127 0 75 1 1 127 2876 3001 PREDICTED: Bos javanicus calcium voltage-gated channel subunit alpha1 B (CACNA1B), transcript variant X2, mRNA blastn 8455 228 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
16763874 16763874 PRJNA1072736_S_NODE_2034_length_242_cov_1.829146_g2029_i0 PRJNA1072736 2034 242 1.829146 4.42653332 Bos taurus 9913 Chordata Chordata 448 2.3799999999999995e-121   NTclustered gi|2587618042|ref|XR_009493711.1| 9913 g2029 i0 100 15.2851239669421 242 0 100 0 1 242 3353 3112 PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344761), ncRNA blastn 3699 448 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
16763876 16763876 PRJNA1072736_S_NODE_2734_length_218_cov_1.777143_g2729_i0 PRJNA1072736 2734 218 1.777143 3.87417174 Moschus berezovskii 68408 Chordata Chordata 254 4.92e-63   NTclustered gi|2492310859|ref|XM_055420944.1| 68408 g2729 i0 87.671 185.949541284404 219 25 100 2 1 218 11402 11619 PREDICTED: Moschus berezovskii pleckstrin homology domain containing A8 (PLEKHA8), transcript variant X4, mRNA blastn 40537 254 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Moschidae Moschus Moschus berezovskii
16763877 16763877 PRJNA1072736_S_NODE_2894_length_213_cov_2.488235_g2889_i0 PRJNA1072736 2894 213 2.488235 5.29994055 Sus scrofa 9823 Chordata Chordata 183 6.369999999999998e-42   NTclustered gi|326438185|emb|CU928843.5| 9823 g2889 i0 82.569 91.4647887323944 218 29 98 6 2 210 100231 100014 Pig DNA sequence from clone CH242-21C18 on chromosome X, complete sequence blastn 19482 183 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
16763880 16763880 PRJNA1072736_S_NODE_3814_length_193_cov_2.193333_g3809_i0 PRJNA1072736 3814 193 2.193333 4.23313269 Bos indicus 9915 Chordata Chordata 335 1.48e-87   NTclustered gi|2878493907|ref|XM_019988563.2| 9915 g3809 i0 97.927 795.170984455959 193 4 100 0 1 193 6064 6256 PREDICTED: Bos indicus prolactin releasing hormone receptor (PRLHR), mRNA blastn 153468 335 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
16763881 16763881 PRJNA1072736_S_NODE_4014_length_190_cov_2.142857_g4009_i0 PRJNA1072736 4014 190 2.142857 4.0714283 Bos taurus 9913 Chordata Chordata 171 4.32e-38   NTclustered gi|2587678129|ref|XR_009493915.1| 9913 g4009 i0 98.947 68.0842105263158 95 1 50 0 96 190 5 99 PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344874), ncRNA blastn 12936 171 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
16763883 16763883 PRJNA1072736_S_NODE_5254_length_172_cov_3.201550_g5249_i0 PRJNA1072736 5254 172 3.20155 5.506666 Dama dama 30532 Chordata Chordata 235 1.33e-57   NTclustered gi|2625331777|ref|XM_061126668.1| 30532 g5249 i0 91.329 686.883720930233 173 13 100 2 1 172 5247 5076 PREDICTED: Dama dama tyrosine-protein phosphatase non-receptor type substrate 1-like (LOC133044855), transcript variant X1, mRNA blastn 118144 235 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Dama Dama dama
17593596 17593596 PRJNA1072736_S_NODE_6114_length_163_cov_2.008333_g6109_i0 PRJNA1072736 6114 163 2.008333 3.27358279 Bovidae 9895 Chordata Chordata 148 1.68e-31   NTclustered gi|1040566755|gb|KT723008.1| 9913 g6109 i0 89.167 73.3558282208589 120 12 74 1 18 137 645999 645881 Bos taurus immunoglobulin heavy chain region, genomic sequence and partial cds blastn 11957 148 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
17593599 17593599 PRJNA1072736_S_NODE_6654_length_158_cov_1.634783_g6649_i0 PRJNA1072736 6654 158 1.634783 2.58295714 Bos 9903 Chordata Chordata 292 7.07e-75   NTclustered gi|381342543|gb|JQ437479.1| 9909 g6649 i0 100 100 158 0 100 0 1 158 1311 1468 Bos primigenius mitochondrion, complete genome blastn 15800 292 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos primigenius
17593600 17593600 PRJNA1072736_S_NODE_754_length_334_cov_1.147766_g749_i0 PRJNA1072736 754 334 1.147766 3.83353844 Bos 9903 Chordata Chordata 198 3.82e-46   NTclustered gi|2633909744|ref|XR_009734766.1| 9906 g749 i0 94.531 635.934131736527 128 7 38 0 137 264 885 758 PREDICTED: Bos javanicus uncharacterized LOC133242093 (LOC133242093), transcript variant X2, ncRNA blastn 212402 200 0.99 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
18038664 18038664 PRJNA1072736_S_NODE_1235_length_284_cov_1.921162_g1230_i0 PRJNA1072736 1235 284 1.921162 5.45610008 Bos taurus 9913 Chordata Chordata 276 1.43e-69   NTclustered gi|51536631|gb|AC150694.2| 9913 g1230 i0 87.866 30.1619718309859 239 24 84 5 1 238 105222 104988 Bos taurus BAC CH240-144A17 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 8566 276 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
18038666 18038666 PRJNA1072736_S_NODE_1315_length_278_cov_4.927660_g1310_i0 PRJNA1072736 1315 278 4.92766 13.6988948 Bos taurus 9913 Chordata Chordata 481 2.75e-131   NTclustered gi|2587618257|ref|XR_009493754.1| 9913 g1310 i0 98.885 29.8776978417266 269 3 97 0 1 269 2232 1964 PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA blastn 8306 481 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
18038667 18038667 PRJNA1072736_S_NODE_255_length_462_cov_1.424821_g250_i0 PRJNA1072736 255 462 1.424821 6.58267302 Bubalus kerabau 3119969 Chordata Chordata 350 1.4200000000000001e-91   NTclustered gi|2496454008|ref|XR_008706032.1| 3119969 g250 i0 92.917 206.246753246753 240 17 52 0 2 241 2843 3082 PREDICTED: Bubalus kerabau uncharacterized LOC129634967 (LOC129634967), ncRNA blastn 95286 350 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;