RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA1072736" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1072736 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2291159 2291159 PRJNA1072736_S_NODE_3082_length_208_cov_2.987879_g3077_i0 PRJNA1072736 3082 208 2.987879 6.21478832 root 1 Root_unresolved Root_unresolved 372 1.23e-98   NTclustered gi|1389182097|gb|CP029160.1| 4932 g3077 i0 99.038 100 208 0 100 1 1 208 5234430 5234635 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 20800 374 0.994652406417112 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
9114567 9114567 PRJNA1072736_S_NODE_3208_length_205_cov_3.518519_g3203_i0 PRJNA1072736 3208 205 3.518519 7.21296395 Beauveria bassiana 176275 Fungi Fungi 379 7.229999999999999e-101   NTclustered gi|1304112037|gb|MG654726.1| 176275 g3203 i0 100 103.278048780488 205 0 100 0 1 205 1666 1462 Beauveria bassiana isolate VSP11 large subunit ribosomal RNA gene, partial sequence blastn 21172 379 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Cordycipitaceae Beauveria Beauveria bassiana
11665619 11665619 PRJNA1072736_S_NODE_4830_length_178_cov_0.985185_g4825_i0 PRJNA1072736 4830 178 0.985185 1.7536293 Cladosporium halotolerans 1052096 Fungi Fungi 209 8.44e-50   NTclustered gi|2837770936|ref|XM_069377483.1| 1052096 g4825 i0 94.776 6.10674157303371 134 7 75 0 45 178 328 195 Cladosporium halotolerans 40S ribosomal protein eS25 (WHR41_08879), mRNA blastn 1087 209 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
17593595 17593595 PRJNA1072736_S_NODE_4634_length_180_cov_2.058394_g4629_i0 PRJNA1072736 4634 180 2.058394 3.7051092 Candelariaceae 452226 Fungi Fungi 230 6.5699999999999985e-56   NTclustered gi|2460928388|gb|OQ646163.1| 411581 g4629 i0 97.744 72.0722222222222 133 3 74 0 48 180 448 316 Candelariella reflexa voucher Herb. Malicek14206 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 12973 230 1 Eukaryota Opisthokonta Fungi Ascomycota Candelariomycetes Candelariales Candelariaceae Candelariella Candelariella reflexa
21863822 21863822 PRJNA1072736_S_NODE_4458_length_183_cov_1.007143_g4453_i0 PRJNA1072736 4458 183 1.007143 1.84307169 Trichoderma atroviride 63577 Fungi Fungi 86.1 1.54e-12   NTclustered gi|2749703766|ref|XM_014090103.2| 63577 g4453 i0 88 2.40983606557377 75 6 41 1 33 107 2269 2198 Trichoderma atroviride uncharacterized protein (TrAtP1_012533), partial mRNA blastn 441 86.1 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma atroviride
24412863 24412863 PRJNA1072736_S_NODE_1340_length_277_cov_1.982906_g1335_i0 PRJNA1072736 1340 277 1.982906 5.49264962 Beauveria bassiana 176275 Fungi Fungi 267 8.36e-67   NTclustered gi|667653266|ref|XM_008600243.1| 655819 g1335 i0 90.547 0.725631768953069 201 19 73 0 77 277 153 353 Beauveria bassiana ARSEF 2860 uncharacterized protein (BBA_05146), partial mRNA blastn 201 267 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Cordycipitaceae Beauveria Beauveria bassiana
32153859 32153859 PRJNA1072736_S_NODE_2178_length_236_cov_1.564767_g2173_i0 PRJNA1072736 2178 236 1.564767 3.69285012 Extremus antarcticus 702011 Fungi Fungi 162 3.77e-49   NR KAK3052181.1 702011 g2173 i0 92.3 1.98305084745763 78 6 99.2 0 234 1 70 147 KAK3052181.1 Mitochondrial matrix iron chaperone [Extremus antarcticus] diamond 468 162 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Extremaceae Extremus Extremus antarcticus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;