RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1072736" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA1072736 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11219233 11219233 PRJNA1072736_S_NODE_49_length_768_cov_7.015172_g44_i0 PRJNA1072736 49 768 7.015172 53.87652096 Gammaretrovirus murleu 3428959 Viruses Viruses 499 1.9499999999999995e-174   NR 8WUS_E 11801 g44 i0 99.2 3.8125 244 2 95.3 0 767 36 121 364 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] diamond 2928 499 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
29498863 29498863 PRJNA1072736_S_NODE_70_length_703_cov_7.416667_g65_i0 PRJNA1072736 70 703 7.416667 52.13916901 Moloney murine leukemia virus 11801 Viruses Viruses 449 4.559999999999998e-143   NR NP_057933.2 11801 g65 i0 97.4 0.990042674253201 232 6 99 0 698 3 1094 1325 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 696 449 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;