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contig_metadata

18 rows where bioproject = "PRJNA1069776" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1069776 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1459475 1459475 PRJNA1069776_S_NODE_38022_length_177_cov_2.671642_g37708_i0 PRJNA1069776 38022 177 2.671642 4.72880634 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.015   NTclustered gi|1557394408|emb|LR031564.1| 45931 g37708 i0 100 0.15819209039548 28 0 16 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
2735701 2735701 PRJNA1069776_S_NODE_9963_length_307_cov_7.412879_g9649_i0 PRJNA1069776 9963 307 7.412879 22.75753853 Pratylenchus vulnus 45931 Nematoda Nematoda 54.7 0.008   NTclustered gi|1557394408|emb|LR031564.1| 45931 g9649 i0 100 0.0944625407166124 29 0 9 0 1 29 23 51 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
5287620 5287620 PRJNA1069776_S_NODE_33805_length_187_cov_2.284722_g33491_i0 PRJNA1069776 33805 187 2.284722 4.27243014 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.016   NTclustered gi|1557394408|emb|LR031564.1| 45931 g33491 i0 100 0.149732620320856 28 0 15 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
6562545 6562545 PRJNA1069776_S_NODE_19106_length_240_cov_2.192893_g18792_i0 PRJNA1069776 19106 240 2.192893 5.2629432 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.022   NTclustered gi|1557394408|emb|LR031564.1| 45931 g18792 i0 100 0.116666666666667 28 0 12 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
10388068 10388068 PRJNA1069776_S_NODE_34469_length_185_cov_3.042254_g34155_i0 PRJNA1069776 34469 185 3.042254 5.6281699 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.016   NTclustered gi|1557394408|emb|LR031564.1| 45931 g34155 i0 100 0.151351351351351 28 0 15 0 158 185 50 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
12938400 12938400 PRJNA1069776_S_NODE_20291_length_234_cov_2.010471_g19977_i0 PRJNA1069776 20291 234 2.010471 4.70450214 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.021   NTclustered gi|1557394408|emb|LR031564.1| 45931 g19977 i0 100 0.11965811965812 28 0 12 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
15487163 15487163 PRJNA1069776_S_NODE_10613_length_301_cov_3.317829_g10299_i0 PRJNA1069776 10613 301 3.317829 9.98666529 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.028   NTclustered gi|1557394408|emb|LR031564.1| 45931 g10299 i0 100 0.0930232558139535 28 0 9 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
16761721 16761721 PRJNA1069776_S_NODE_32934_length_189_cov_2.917808_g32620_i0 PRJNA1069776 32934 189 2.917808 5.51465712 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.016   NTclustered gi|1557394408|emb|LR031564.1| 45931 g32620 i0 100 0.148148148148148 28 0 15 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
19310291 19310291 PRJNA1069776_S_NODE_22076_length_225_cov_4.593407_g21762_i0 PRJNA1069776 22076 225 4.593407 10.33516575 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.02   NTclustered gi|1557394408|emb|LR031564.1| 45931 g21762 i0 100 0.124444444444444 28 0 12 0 198 225 50 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
19310434 19310434 PRJNA1069776_S_NODE_33416_length_188_cov_2.268966_g33102_i0 PRJNA1069776 33416 188 2.268966 4.26565608 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.016   NTclustered gi|1557394408|emb|LR031564.1| 45931 g33102 i0 100 0.148936170212766 28 0 15 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
20585921 20585921 PRJNA1069776_S_NODE_37977_length_177_cov_3.119403_g37663_i0 PRJNA1069776 37977 177 3.119403 5.52134331 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.015   NTclustered gi|1557394408|emb|LR031564.1| 45931 g37663 i0 100 0.15819209039548 28 0 16 0 150 177 50 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
23136887 23136887 PRJNA1069776_S_NODE_14279_length_270_cov_2.176211_g13965_i0 PRJNA1069776 14279 270 2.176211 5.8757697 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.025   NTclustered gi|1557394408|emb|LR031564.1| 45931 g13965 i0 100 0.103703703703704 28 0 10 0 243 270 50 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
24410724 24410724 PRJNA1069776_S_NODE_34500_length_185_cov_2.704225_g34186_i0 PRJNA1069776 34500 185 2.704225 5.00281625 Pratylenchus vulnus 45931 Nematoda Nematoda 54.7 0.004   NTclustered gi|1557394408|emb|LR031564.1| 45931 g34186 i0 94.444 0.194594594594595 36 0 18 1 152 185 58 23 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 36 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
29941146 29941146 PRJNA1069776_S_NODE_21191_length_229_cov_4.892473_g20877_i0 PRJNA1069776 21191 229 4.892473 11.20376317 Meloidogyne enterolobii 390850 Nematoda Nematoda 42.4 0.0427   NR CAD2183941.1 390850 g20877 i0 41.4 1.83406113537118 70 31 81.2 3 203 18 1264 1331 CAD2183941.1 unnamed protein product [Meloidogyne enterolobii] diamond 420 42.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
30225301 30225301 PRJNA1069776_S_NODE_53952_length_151_cov_2.768519_g53638_i0 PRJNA1069776 53952 151 2.768519 4.18046369 Trichinella pseudospiralis 6337 Nematoda Nematoda 41.6 0.0276   NR KRY87921.1 6337 g53638 i0 50 0.913907284768212 46 23 91.4 0 151 14 327 372 KRY87921.1 hypothetical protein T4D_14233 [Trichinella pseudospiralis] diamond 138 41.6 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
30257291 30257291 PRJNA1069776_S_NODE_28852_length_200_cov_3.974522_g28538_i0 PRJNA1069776 28852 200 3.974522 7.949044 Ostertagia ostertagi 6317 Nematoda Nematoda 39.7 0.0377   NR KAK6026689.1 6317 g28538 i0 55.9 0.51 34 15 51 0 90 191 9 42 KAK6026689.1 hypothetical protein OSTOST_07329, partial [Ostertagia ostertagi] diamond 102 39.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Ostertagia Ostertagia ostertagi
30888846 30888846 PRJNA1069776_S_NODE_1954_length_504_cov_25.225597_g1652_i0 PRJNA1069776 1954 504 25.225597 127.13700888 Dictyocaulus viviparus 29172 Nematoda Nematoda 59.3 7.15e-8   NR KJH41339.1 29172 g1652 i0 100 0.142857142857143 24 0 14.3 0 382 453 32 55 KJH41339.1 hypothetical protein DICVIV_12690 [Dictyocaulus viviparus] diamond 72 59.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Dictyocaulus Dictyocaulus viviparus
31932174 31932174 PRJNA1069776_S_NODE_3837_length_401_cov_16.413408_g3523_i0 PRJNA1069776 3837 401 16.413408 65.81776608 Dictyocaulus viviparus 29172 Nematoda Nematoda 59.3 2.94e-8   NR KJH41339.1 29172 g3523 i0 100 0.179551122194514 24 0 18 0 279 350 32 55 KJH41339.1 hypothetical protein DICVIV_12690 [Dictyocaulus viviparus] diamond 72 59.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Dictyocaulus Dictyocaulus viviparus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;