contig_metadata
79 rows where bioproject = "PRJNA1069776" and tax_phylum = "Kitrinoviricota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 184558 | 184558 | PRJNA1069776_S_NODE_16701_length_254_cov_3.360190_g16387_i0 | PRJNA1069776 | 16701 | 254 | 3.36019 | 8.5348826 | Pestivirus bovis | 3052619 | Viruses | Viruses | 399 | 7.149999999999999e-107 | NTclustered | gi|1129880487|gb|KX170611.1| | 11099 | g16387 | i0 | 94.882 | 99.7795275590551 | 254 | 13 | 100 | 0 | 1 | 254 | 13 | 266 | Bovine viral diarrhea virus 1 isolate V098 NS5A gene, partial cds | blastn | 25344 | 399 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 184667 | 184667 | PRJNA1069776_S_NODE_2441_length_465_cov_9.808057_g2128_i0 | PRJNA1069776 | 2441 | 465 | 9.808057 | 45.60746505 | Pestivirus bovis | 3052619 | Viruses | Viruses | 743 | 0 | NTclustered | gi|1540352923|gb|MH231153.1| | 11099 | g2128 | i0 | 95.484 | 99.5225806451613 | 465 | 21 | 100 | 0 | 1 | 465 | 3981 | 4445 | Bovine viral diarrhea virus 1 isolate Nebraska polyprotein gene, complete cds | blastn | 46278 | 743 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 184703 | 184703 | PRJNA1069776_S_NODE_2681_length_448_cov_86.866667_g2368_i0 | PRJNA1069776 | 2681 | 448 | 86.866667 | 389.16266816 | Pestivirus bovis | 3052619 | Viruses | Viruses | 728 | 0 | NTclustered | gi|459284076|gb|JX297517.1| | 981676 | g2368 | i0 | 95.982 | 100.897321428571 | 448 | 18 | 100 | 0 | 1 | 448 | 203 | 650 | Bovine viral diarrhea virus type 1b isolate Hercules polyprotein gene, complete cds | blastn | 45202 | 728 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1014674 | 1014674 | PRJNA1069776_S_NODE_34081_length_186_cov_3.202797_g33767_i0 | PRJNA1069776 | 34081 | 186 | 3.202797 | 5.95720242 | Pestivirus | 11095 | Viruses | Viruses | 300 | 5.1400000000000004e-77 | NTclustered | gi|1129880587|gb|KX170661.1| | 11099 | g33767 | i0 | 95.699 | 99.4247311827957 | 186 | 8 | 100 | 0 | 1 | 186 | 1488 | 1673 | Bovine viral diarrhea virus 1 isolate V045 NS5B gene, partial cds | blastn | 18493 | 303 | 0.99009900990099 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1459138 | 1459138 | PRJNA1069776_S_NODE_1342_length_590_cov_13.881170_g1068_i0 | PRJNA1069776 | 1342 | 590 | 13.88117 | 81.898903 | Pestivirus bovis | 3052619 | Viruses | Viruses | 1013 | 0 | NTclustered | gi|1129880361|gb|KX170548.1| | 11099 | g1068 | i0 | 97.627 | 99.9847457627119 | 590 | 14 | 100 | 0 | 1 | 590 | 242 | 831 | Bovine viral diarrhea virus 1 isolate V060 NS4B gene, partial cds | blastn | 58991 | 1013 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1459157 | 1459157 | PRJNA1069776_S_NODE_1462_length_569_cov_7.317490_g1180_i0 | PRJNA1069776 | 1462 | 569 | 7.31749 | 41.6365181 | Pestivirus tauri | 3052626 | Viruses | Viruses | 1007 | 0 | NTclustered | gi|1540352891|gb|MH231137.1| | 54315 | g1180 | i0 | 98.594 | 99.4604569420035 | 569 | 8 | 100 | 0 | 1 | 569 | 1179 | 611 | Bovine viral diarrhea virus 2 isolate MadSpl polyprotein gene, complete cds | blastn | 56593 | 1007 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 1459179 | 1459179 | PRJNA1069776_S_NODE_16222_length_257_cov_2.901869_g15908_i0 | PRJNA1069776 | 16222 | 257 | 2.901869 | 7.45780333 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 54.7 | 0.006 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g15908 | i0 | 100 | 0.221789883268482 | 29 | 0 | 11 | 0 | 1 | 29 | 6 | 34 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 57 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 1459233 | 1459233 | PRJNA1069776_S_NODE_2042_length_496_cov_11.604857_g1739_i0 | PRJNA1069776 | 2042 | 496 | 11.604857 | 57.56009072 | Pestivirus bovis | 3052619 | Viruses | Viruses | 797 | 0 | NTclustered | gi|1072900293|gb|KU756226.1| | 981676 | g1739 | i0 | 95.927 | 99.5766129032258 | 491 | 20 | 99 | 0 | 2 | 492 | 7059 | 7549 | Bovine viral diarrhea virus 1b strain HJ-1 polyprotein gene, complete cds | blastn | 49390 | 797 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 1459625 | 1459625 | PRJNA1069776_S_NODE_5242_length_369_cov_4.858896_g4928_i0 | PRJNA1069776 | 5242 | 369 | 4.858896 | 17.92932624 | Pestivirus bovis | 3052619 | Viruses | Viruses | 590 | 6.0099999999999985e-164 | NTclustered | gi|1129880209|gb|KX170472.1| | 11099 | g4928 | i0 | 95.393 | 103.436314363144 | 369 | 17 | 100 | 0 | 1 | 369 | 643 | 1011 | Bovine viral diarrhea virus 1 isolate V099 NS3 gene, partial cds | blastn | 38168 | 590 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2289983 | 2289983 | PRJNA1069776_S_NODE_36802_length_180_cov_1.751825_g36488_i0 | PRJNA1069776 | 36802 | 180 | 1.751825 | 3.153285 | root | 1 | Root_unresolved | Root_unresolved | 54.7 | 0.004 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g36488 | i0 | 92.308 | 1 | 39 | 2 | 22 | 1 | 1 | 39 | 13 | 50 | Carnation latent virus isolate KL, complete genome | blastn | 180 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 2735095 | 2735095 | PRJNA1069776_S_NODE_13683_length_274_cov_7.051948_g13369_i0 | PRJNA1069776 | 13683 | 274 | 7.051948 | 19.32233752 | Pestivirus tauri | 3052626 | Viruses | Viruses | 429 | 9.949999999999999e-116 | NTclustered | gi|1540305503|gb|MH806435.1| | 54315 | g13369 | i0 | 94.891 | 99.463503649635 | 274 | 14 | 100 | 0 | 1 | 274 | 1805 | 1532 | Bovine viral diarrhea virus 2 isolate 1336H, complete genome | blastn | 27253 | 429 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 2735695 | 2735695 | PRJNA1069776_S_NODE_9523_length_312_cov_5.271375_g9209_i0 | PRJNA1069776 | 9523 | 312 | 5.271375 | 16.44669 | Pestivirus bovis | 3052619 | Viruses | Viruses | 527 | 3.9799999999999996e-145 | NTclustered | gi|1408941636|gb|MH311877.1| | 981676 | g9209 | i0 | 97.115 | 99.9551282051282 | 312 | 9 | 100 | 0 | 1 | 312 | 1131 | 1442 | Bovine viral diarrhea virus 1b isolate B4A d168 polyprotein gene, partial cds | blastn | 31186 | 527 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 2735696 | 2735696 | PRJNA1069776_S_NODE_9543_length_312_cov_3.843866_g9229_i0 | PRJNA1069776 | 9543 | 312 | 3.843866 | 11.99286192 | Pestivirus bovis | 3052619 | Viruses | Viruses | 438 | 1.9199999999999998e-118 | NTclustered | gi|2587731848|gb|OR620203.1| | 11099 | g9229 | i0 | 91.987 | 65.650641025641 | 312 | 25 | 100 | 0 | 1 | 312 | 4348 | 4037 | Bovine viral diarrhea virus 1 strain 2402UYSJ/2016, partial genome | blastn | 20483 | 438 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 3565213 | 3565213 | PRJNA1069776_S_NODE_2263_length_478_cov_17.698851_g1953_i0 | PRJNA1069776 | 2263 | 478 | 17.698851 | 84.60050778 | Pestivirus | 11095 | Viruses | Viruses | 665 | 0 | NTclustered | gi|386285712|gb|JQ418633.1| | 11099 | g1953 | i0 | 93.157 | 44.9142259414226 | 453 | 31 | 95 | 0 | 4 | 456 | 9842 | 9390 | Bovine viral diarrhea virus 1 isolate 08GB44-1 polyprotein gene, complete cds | blastn | 21469 | 665 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4011012 | 4011012 | PRJNA1069776_S_NODE_12984_length_280_cov_3.130802_g12670_i0 | PRJNA1069776 | 12984 | 280 | 3.130802 | 8.7662456 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 56.5 | 0.002 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g12670 | i0 | 100 | 0.207142857142857 | 30 | 0 | 11 | 0 | 251 | 280 | 35 | 6 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 58 | 56.5 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 4011122 | 4011122 | PRJNA1069776_S_NODE_20524_length_232_cov_8.444444_g20210_i0 | PRJNA1069776 | 20524 | 232 | 8.444444 | 19.59111008 | Pestivirus bovis | 3052619 | Viruses | Viruses | 390 | 3.87e-104 | NTclustered | gi|1129880601|gb|KX170668.1| | 11099 | g20210 | i0 | 96.983 | 99.3189655172414 | 232 | 7 | 100 | 0 | 1 | 232 | 1010 | 779 | Bovine viral diarrhea virus 1 isolate V100 NS5B gene, partial cds | blastn | 23042 | 390 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4011378 | 4011378 | PRJNA1069776_S_NODE_40704_length_172_cov_0.914729_g40390_i0 | PRJNA1069776 | 40704 | 172 | 0.914729 | 1.57333388 | Pestivirus tauri | 3052626 | Viruses | Viruses | 307 | 2.79e-79 | NTclustered | gi|998226330|gb|KT832820.1| | 54315 | g40390 | i0 | 98.837 | 98.2848837209302 | 172 | 2 | 100 | 0 | 1 | 172 | 11622 | 11451 | Bovine viral diarrhea virus 2 strain USMARC-60767, complete genome | blastn | 16905 | 307 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 4011538 | 4011538 | PRJNA1069776_S_NODE_5884_length_358_cov_2.387302_g5570_i0 | PRJNA1069776 | 5884 | 358 | 2.387302 | 8.54654116 | Pestivirus bovis | 3052619 | Viruses | Viruses | 534 | 2.76e-147 | NTclustered | gi|633265981|gb|KJ541471.1| | 11099 | g5570 | i0 | 93.575 | 96.9832402234637 | 358 | 23 | 100 | 0 | 1 | 358 | 4289 | 4646 | Bovine viral diarrhea virus 1 isolate GS5, complete genome | blastn | 34720 | 534 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4011585 | 4011585 | PRJNA1069776_S_NODE_9504_length_312_cov_8.115242_g9190_i0 | PRJNA1069776 | 9504 | 312 | 8.115242 | 25.31955504 | Pestivirus bovis | 3052619 | Viruses | Viruses | 540 | 5.11e-149 | NTclustered | gi|916370596|gb|KT355592.1| | 981676 | g9190 | i0 | 98.689 | 97.6217948717949 | 305 | 3 | 97 | 1 | 1 | 304 | 8853 | 9157 | Bovine viral diarrhea virus type 1b strain HP-KY-RK13, complete genome | blastn | 30458 | 540 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 4842737 | 4842737 | PRJNA1069776_S_NODE_41224_length_171_cov_1.125000_g40910_i0 | PRJNA1069776 | 41224 | 171 | 1.125 | 1.92375 | Pestivirus | 11095 | Viruses | Viruses | 300 | 4.63e-77 | NTclustered | gi|386285714|gb|JQ418635.1| | 54315 | g40910 | i0 | 98.246 | 60.9766081871345 | 171 | 3 | 100 | 0 | 1 | 171 | 10031 | 9861 | Bovine viral diarrhea virus 2 isolate 08Q723 polyprotein gene, complete cds | blastn | 10427 | 300 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 5287286 | 5287286 | PRJNA1069776_S_NODE_1225_length_618_cov_13.415652_g962_i0 | PRJNA1069776 | 1225 | 618 | 13.415652 | 82.90872936 | Pestivirus bovis | 3052619 | Viruses | Viruses | 915 | 0 | NTclustered | gi|2040746277|gb|MT654137.1| | 11099 | g962 | i0 | 93.366 | 96.1003236245955 | 618 | 41 | 100 | 0 | 1 | 618 | 1640 | 1023 | Bovine viral diarrhea virus 1 strain 20-8536, complete genome | blastn | 59390 | 915 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 5287409 | 5287409 | PRJNA1069776_S_NODE_19245_length_239_cov_3.183673_g18931_i0 | PRJNA1069776 | 19245 | 239 | 3.183673 | 7.60897847 | Pestivirus bovis | 3052619 | Viruses | Viruses | 372 | 1.45e-98 | NTclustered | gi|575471150|gb|KF772785.1| | 11099 | g18931 | i0 | 95.299 | 99.5983263598326 | 234 | 11 | 98 | 0 | 1 | 234 | 8124 | 8357 | Bovine viral diarrhea virus 1 isolate CC13B, complete genome | blastn | 23804 | 372 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 5287412 | 5287412 | PRJNA1069776_S_NODE_1945_length_505_cov_13.621212_g1644_i0 | PRJNA1069776 | 1945 | 505 | 13.621212 | 68.7871206 | Pestivirus tauri | 3052626 | Viruses | Viruses | 689 | 0 | NTclustered | gi|1751376243|gb|MK599227.1| | 54315 | g1644 | i0 | 91.287 | 99.950495049505 | 505 | 44 | 100 | 0 | 1 | 505 | 9634 | 9130 | Bovine viral diarrhea virus 2 strain SD-1 polyprotein gene, complete cds | blastn | 50475 | 689 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 6117921 | 6117921 | PRJNA1069776_S_NODE_5405_length_366_cov_8.083591_g5091_i0 | PRJNA1069776 | 5405 | 366 | 8.083591 | 29.58594306 | Pestivirus | 11095 | Viruses | Viruses | 592 | 1.6599999999999993e-164 | NTclustered | gi|1036031867|gb|AH012705.2| | 11099 | g5091 | i0 | 96.629 | 97.0765027322404 | 356 | 12 | 97 | 0 | 1 | 356 | 4925 | 5280 | Bovine viral diarrhea virus 1 strain CP8 polyprotein genes, partial cds | blastn | 35530 | 592 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6117934 | 6117934 | PRJNA1069776_S_NODE_6765_length_344_cov_8.478405_g6451_i0 | PRJNA1069776 | 6765 | 344 | 8.478405 | 29.1657132 | Pestivirus | 11095 | Viruses | Viruses | 568 | 2.6099999999999992e-157 | NTclustered | gi|2625903273|gb|ON676187.1| | 11099 | g6451 | i0 | 96.501 | 99.6220930232558 | 343 | 12 | 99 | 0 | 2 | 344 | 11493 | 11151 | Bovine viral diarrhea virus 1 strain Chilgok, complete genome | blastn | 34270 | 568 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6562595 | 6562595 | PRJNA1069776_S_NODE_22266_length_224_cov_5.403315_g21952_i0 | PRJNA1069776 | 22266 | 224 | 5.403315 | 12.1034256 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.006 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g21952 | i0 | 100 | 0.660714285714286 | 29 | 0 | 13 | 0 | 1 | 29 | 13 | 41 | Carnation latent virus isolate KL, complete genome | blastn | 148 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 6562844 | 6562844 | PRJNA1069776_S_NODE_3986_length_397_cov_15.124294_g3672_i0 | PRJNA1069776 | 3986 | 397 | 15.124294 | 60.04344718 | Pestivirus bovis | 3052619 | Viruses | Viruses | 667 | 0 | NTclustered | gi|1350888790|gb|KY852366.1| | 11099 | g3672 | i0 | 96.977 | 99.6146095717884 | 397 | 12 | 100 | 0 | 1 | 397 | 23 | 419 | Bovine viral diarrhea virus 1 isolate S1118 E2 glycoprotein gene, partial cds | blastn | 39547 | 667 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 6562985 | 6562985 | PRJNA1069776_S_NODE_5266_length_368_cov_28.646154_g4952_i0 | PRJNA1069776 | 5266 | 368 | 28.646154 | 105.41784672 | Pestivirus bovis | 3052619 | Viruses | Viruses | 592 | 1.6699999999999997e-164 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g4952 | i0 | 96.379 | 97.2527173913043 | 359 | 13 | 98 | 0 | 1 | 359 | 9801 | 10159 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 35789 | 592 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 7837324 | 7837324 | PRJNA1069776_S_NODE_29467_length_198_cov_4.741935_g29153_i0 | PRJNA1069776 | 29467 | 198 | 4.741935 | 9.3890313 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.005 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g29153 | i0 | 100 | 0.747474747474748 | 29 | 0 | 15 | 0 | 170 | 198 | 41 | 13 | Carnation latent virus isolate KL, complete genome | blastn | 148 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 9112333 | 9112333 | PRJNA1069776_S_NODE_29988_length_197_cov_2.701299_g29674_i0 | PRJNA1069776 | 29988 | 197 | 2.701299 | 5.32155903 | Pestivirus bovis | 3052619 | Viruses | Viruses | 305 | 1.19e-78 | NTclustered | gi|2648477067|gb|OR238997.1| | 11099 | g29674 | i0 | 94.416 | 100.055837563452 | 197 | 11 | 100 | 0 | 1 | 197 | 760 | 564 | Bovine viral diarrhea virus 1 isolate 125_SL35 envelope glycoprotein E2 gene, partial cds | blastn | 19711 | 305 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 10387869 | 10387869 | PRJNA1069776_S_NODE_19449_length_238_cov_3.133333_g19135_i0 | PRJNA1069776 | 19449 | 238 | 3.133333 | 7.45733254 | Pestivirus tauri | 3052626 | Viruses | Viruses | 390 | 3.99e-104 | NTclustered | gi|1751376243|gb|MK599227.1| | 54315 | g19135 | i0 | 96.218 | 99.9747899159664 | 238 | 9 | 100 | 0 | 1 | 238 | 8744 | 8981 | Bovine viral diarrhea virus 2 strain SD-1 polyprotein gene, complete cds | blastn | 23794 | 390 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 10388111 | 10388111 | PRJNA1069776_S_NODE_37529_length_178_cov_2.844444_g37215_i0 | PRJNA1069776 | 37529 | 178 | 2.844444 | 5.06311032 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 54.7 | 0.004 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g37215 | i0 | 94.286 | 0.353932584269663 | 35 | 2 | 20 | 0 | 1 | 35 | 6 | 40 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 63 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 10388265 | 10388265 | PRJNA1069776_S_NODE_52709_length_152_cov_3.844037_g52395_i0 | PRJNA1069776 | 52709 | 152 | 3.844037 | 5.84293624 | Pestivirus bovis | 3052619 | Viruses | Viruses | 215 | 1.5e-51 | NTclustered | gi|1771880388|emb|LR699803.1| | 11099 | g52395 | i0 | 92.105 | 86.4013157894737 | 152 | 12 | 100 | 0 | 1 | 152 | 11700 | 11851 | bovine viral diarrhea virus polyprotein gene for polyprotein, Npro, C, E1, E2, p7, NS2, NS3, NS4A, NS4B, NS5A, NS5B region | blastn | 13133 | 215 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 10388357 | 10388357 | PRJNA1069776_S_NODE_9529_length_312_cov_4.513011_g9215_i0 | PRJNA1069776 | 9529 | 312 | 4.513011 | 14.08059432 | Pestivirus bovis | 3052619 | Viruses | Viruses | 477 | 4.06e-130 | NTclustered | gi|165292292|dbj|AB359924.1| | 11099 | g9215 | i0 | 94.231 | 99.9615384615385 | 312 | 18 | 100 | 0 | 1 | 312 | 1241 | 930 | Bovine viral diarrhea virus 1 gene for polyprotein (N-terminal protease, Core, Erns region), partial cds, strain: IS27CP/01 | blastn | 31188 | 477 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 11663506 | 11663506 | PRJNA1069776_S_NODE_3690_length_405_cov_15.566298_g3376_i0 | PRJNA1069776 | 3690 | 405 | 15.566298 | 63.0435069 | Pestivirus bovis | 3052619 | Viruses | Viruses | 586 | 8.609999999999997e-163 | NTclustered | gi|77799875|dbj|AB111961.2| | 233883 | g3376 | i0 | 92.822 | 99.4543209876543 | 404 | 29 | 99 | 0 | 2 | 405 | 2052 | 2455 | Bovine viral diarrhea virus 799ncp gene for poryprotein, partai cds, strain: 799ncp | blastn | 40279 | 586 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 11663647 | 11663647 | PRJNA1069776_S_NODE_4990_length_373_cov_22.878788_g4676_i0 | PRJNA1069776 | 4990 | 373 | 22.878788 | 85.33787924 | Pestivirus bovis | 3052619 | Viruses | Viruses | 573 | 6.119999999999999e-159 | NTclustered | gi|2086549820|dbj|LC648259.1| | 981676 | g4676 | i0 | 94.58 | 99.7855227882037 | 369 | 20 | 99 | 0 | 5 | 373 | 1347 | 979 | Bovine viral diarrhea virus 1b BVDV/Shihoro/O_39 gene for structural glycoprotein E2, partial cds | blastn | 37220 | 573 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12493650 | 12493650 | PRJNA1069776_S_NODE_770_length_818_cov_19.920000_g617_i0 | PRJNA1069776 | 770 | 818 | 19.92 | 162.9456 | Pestivirus | 11095 | Viruses | Viruses | 1218 | 0 | NTclustered | gi|2789676|gb|AF041040.1|AF041040 | 11099 | g617 | i0 | 93.529 | 99.3068459657702 | 819 | 51 | 100 | 2 | 1 | 818 | 1114 | 297 | Pestivirus type 1 polyprotein gene, complete cds | blastn | 81233 | 1218 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12493659 | 12493659 | PRJNA1069776_S_NODE_9170_length_315_cov_11.768382_g8856_i0 | PRJNA1069776 | 9170 | 315 | 11.768382 | 37.0704033 | Pestivirus | 11095 | Viruses | Viruses | 507 | 5.24e-139 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g8856 | i0 | 95.847 | 99.984126984127 | 313 | 13 | 99 | 0 | 3 | 315 | 4336 | 4024 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 31495 | 507 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12938389 | 12938389 | PRJNA1069776_S_NODE_1951_length_504_cov_79.845987_g1649_i0 | PRJNA1069776 | 1951 | 504 | 79.845987 | 402.42377448 | Pestivirus bovis | 3052619 | Viruses | Viruses | 832 | 0 | NTclustered | gi|77799875|dbj|AB111961.2| | 233883 | g1649 | i0 | 96.429 | 100.813492063492 | 504 | 18 | 100 | 0 | 1 | 504 | 386 | 889 | Bovine viral diarrhea virus 799ncp gene for poryprotein, partai cds, strain: 799ncp | blastn | 50810 | 832 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 12938874 | 12938874 | PRJNA1069776_S_NODE_9691_length_310_cov_7.033708_g9377_i0 | PRJNA1069776 | 9691 | 310 | 7.033708 | 21.8044948 | Pestivirus bovis | 3052619 | Viruses | Viruses | 484 | 2.4099999999999996e-132 | NTclustered | gi|1418359717|dbj|LC068605.1| | 11099 | g9377 | i0 | 94.839 | 99.9870967741935 | 310 | 16 | 100 | 0 | 1 | 310 | 10705 | 10396 | Bovine viral diarrhea virus 1 genomic RNA, complete genome, strain: No.12_E- | blastn | 30996 | 484 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 13768025 | 13768025 | PRJNA1069776_S_NODE_3391_length_416_cov_12.021448_g3077_i0 | PRJNA1069776 | 3391 | 416 | 12.021448 | 50.00922368 | Pestivirus | 11095 | Viruses | Viruses | 673 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g3077 | i0 | 95.904 | 99.9663461538462 | 415 | 17 | 99 | 0 | 2 | 416 | 5911 | 5497 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 41586 | 673 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 14213572 | 14213572 | PRJNA1069776_S_NODE_40412_length_172_cov_3.279070_g40098_i0 | PRJNA1069776 | 40412 | 172 | 3.27907 | 5.6400004 | Pestivirus bovis | 3052619 | Viruses | Viruses | 268 | 1.32e-67 | NTclustered | gi|800924330|gb|KP941590.1| | 11099 | g40098 | i0 | 94.767 | 78.5058139534884 | 172 | 9 | 100 | 0 | 1 | 172 | 4444 | 4273 | Bovine viral diarrhea virus 1 strain USMARC-55924 polyprotein gene, complete cds | blastn | 13503 | 268 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15042287 | 15042287 | PRJNA1069776_S_NODE_15752_length_259_cov_50.856481_g15438_i0 | PRJNA1069776 | 15752 | 259 | 50.856481 | 131.71828579 | Pestivirus | 11095 | Viruses | Viruses | 412 | 9.39e-111 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g15438 | i0 | 95.367 | 100.891891891892 | 259 | 12 | 100 | 0 | 1 | 259 | 1017 | 759 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 26131 | 412 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 15487427 | 15487427 | PRJNA1069776_S_NODE_29833_length_197_cov_4.272727_g29519_i0 | PRJNA1069776 | 29833 | 197 | 4.272727 | 8.41727219 | Pestivirus tauri | 3052626 | Viruses | Viruses | 320 | 4.24e-83 | NTclustered | gi|346577970|gb|JF714967.1| | 54315 | g29519 | i0 | 95.939 | 87.1928934010152 | 197 | 8 | 100 | 0 | 1 | 197 | 10973 | 11169 | Bovine viral diarrhea virus 2 strain HLJ-10, complete genome | blastn | 17177 | 320 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 16317091 | 16317091 | PRJNA1069776_S_NODE_2033_length_497_cov_71.726872_g1730_i0 | PRJNA1069776 | 2033 | 497 | 71.726872 | 356.48255384 | Pestivirus | 11095 | Viruses | Viruses | 819 | 0 | NTclustered | gi|2634048157|gb|OR611923.3| | 11099 | g1730 | i0 | 96.378 | 99.9839034205231 | 497 | 18 | 100 | 0 | 1 | 497 | 748 | 1244 | Bovine viral diarrhea virus 1 isolate 18H17 polyprotein gene, complete cds | blastn | 49692 | 819 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 16761441 | 16761441 | PRJNA1069776_S_NODE_13654_length_274_cov_56.497835_g13340_i0 | PRJNA1069776 | 13654 | 274 | 56.497835 | 154.8040679 | Pestivirus bovis | 3052619 | Viruses | Viruses | 442 | 1.2799999999999994e-119 | NTclustered | gi|953966940|dbj|LC099927.1| | 11099 | g13340 | i0 | 97.665 | 93.1386861313869 | 257 | 6 | 94 | 0 | 1 | 257 | 282 | 26 | Bovine viral diarrhea virus 1 genomic RNA, 5' UTR, partial sequence, isolate: Mongolia_3 | blastn | 25520 | 442 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 16761498 | 16761498 | PRJNA1069776_S_NODE_1794_length_523_cov_3.395833_g1496_i0 | PRJNA1069776 | 1794 | 523 | 3.395833 | 17.76020659 | Pestivirus bovis | 3052619 | Viruses | Viruses | 795 | 0 | NTclustered | gi|1129880425|gb|KX170580.1| | 11099 | g1496 | i0 | 94.073 | 99.7992351816444 | 523 | 31 | 100 | 0 | 1 | 523 | 899 | 377 | Bovine viral diarrhea virus 1 isolate V099 NS4B gene, partial cds | blastn | 52195 | 795 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 16761928 | 16761928 | PRJNA1069776_S_NODE_52014_length_153_cov_2.545455_g51700_i0 | PRJNA1069776 | 52014 | 153 | 2.545455 | 3.89454615 | Pestivirus bovis | 3052619 | Viruses | Viruses | 267 | 4.1099999999999994e-67 | NTclustered | gi|323219|gb|M87815.1|BVDMSEQK | 11099 | g51700 | i0 | 98.039 | 99.5555555555556 | 153 | 3 | 100 | 0 | 1 | 153 | 212 | 60 | Bovine viral diarrhea virus mRNA sequence | blastn | 15232 | 267 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 16761989 | 16761989 | PRJNA1069776_S_NODE_7474_length_335_cov_16.219178_g7160_i0 | PRJNA1069776 | 7474 | 335 | 16.219178 | 54.3342463 | Pestivirus bovis | 3052619 | Viruses | Viruses | 523 | 5.569999999999998e-144 | NTclustered | gi|1540352923|gb|MH231153.1| | 11099 | g7160 | i0 | 94.91 | 99.7462686567164 | 334 | 17 | 99 | 0 | 2 | 335 | 1031 | 1364 | Bovine viral diarrhea virus 1 isolate Nebraska polyprotein gene, complete cds | blastn | 33415 | 523 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 18036351 | 18036351 | PRJNA1069776_S_NODE_20635_length_232_cov_3.111111_g20321_i0 | PRJNA1069776 | 20635 | 232 | 3.111111 | 7.21777752 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.006 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g20321 | i0 | 100 | 0.607758620689655 | 29 | 0 | 13 | 0 | 1 | 29 | 13 | 41 | Carnation latent virus isolate KL, complete genome | blastn | 141 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 18866125 | 18866125 | PRJNA1069776_S_NODE_10015_length_306_cov_50.323194_g9701_i0 | PRJNA1069776 | 10015 | 306 | 50.323194 | 153.98897364 | Pestivirus | 11095 | Viruses | Viruses | 516 | 8.42e-142 | NTclustered | gi|800924330|gb|KP941590.1| | 11099 | g9701 | i0 | 97.059 | 99.8725490196078 | 306 | 9 | 100 | 0 | 1 | 306 | 610 | 305 | Bovine viral diarrhea virus 1 strain USMARC-55924 polyprotein gene, complete cds | blastn | 30561 | 516 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 18866149 | 18866149 | PRJNA1069776_S_NODE_1255_length_609_cov_11.151943_g991_i0 | PRJNA1069776 | 1255 | 609 | 11.151943 | 67.91533287 | Pestivirus | 11095 | Viruses | Viruses | 1037 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g991 | i0 | 97.373 | 99.9770114942529 | 609 | 16 | 100 | 0 | 1 | 609 | 10450 | 11058 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 60886 | 1037 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19310369 | 19310369 | PRJNA1069776_S_NODE_27716_length_204_cov_2.913043_g27402_i0 | PRJNA1069776 | 27716 | 204 | 2.913043 | 5.94260772 | Pestivirus bovis | 3052619 | Viruses | Viruses | 259 | 9.77e-65 | NTclustered | gi|642598|gb|L35851.1|BVDP125D | 11099 | g27402 | i0 | 89.655 | 10.3627450980392 | 203 | 21 | 99 | 0 | 2 | 204 | 592 | 390 | Bovine viral diarrhea virus (strain Oregon) p125 gene, partial cds | blastn | 2114 | 259 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 19310753 | 19310753 | PRJNA1069776_S_NODE_8956_length_318_cov_3.690909_g8642_i0 | PRJNA1069776 | 8956 | 318 | 3.690909 | 11.73709062 | Pestivirus bovis | 3052619 | Viruses | Viruses | 527 | 4.06e-145 | NTclustered | gi|1540352923|gb|MH231153.1| | 11099 | g8642 | i0 | 96.541 | 99.8207547169811 | 318 | 11 | 100 | 0 | 1 | 318 | 3981 | 4298 | Bovine viral diarrhea virus 1 isolate Nebraska polyprotein gene, complete cds | blastn | 31743 | 527 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20141020 | 20141020 | PRJNA1069776_S_NODE_15656_length_260_cov_4.447005_g15342_i0 | PRJNA1069776 | 15656 | 260 | 4.447005 | 11.562213 | Pestivirus | 11095 | Viruses | Viruses | 429 | 9.37e-116 | NTclustered | gi|642598|gb|L35851.1|BVDP125D | 11099 | g15342 | i0 | 96.525 | 101.326923076923 | 259 | 9 | 99 | 0 | 2 | 260 | 2232 | 2490 | Bovine viral diarrhea virus (strain Oregon) p125 gene, partial cds | blastn | 26345 | 429 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20585568 | 20585568 | PRJNA1069776_S_NODE_13557_length_275_cov_6.073276_g13243_i0 | PRJNA1069776 | 13557 | 275 | 6.073276 | 16.701509 | Pestivirus bovis | 3052619 | Viruses | Viruses | 472 | 1.64e-128 | NTclustered | gi|2858850717|gb|PQ613792.1| | 11099 | g13243 | i0 | 97.81 | 99.6036363636364 | 274 | 5 | 99 | 1 | 2 | 275 | 5454 | 5182 | Bovine viral diarrhea virus 1 isolate USMARC/PI-91-21/MDBK polyprotein gene, complete cds | blastn | 27391 | 472 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20585650 | 20585650 | PRJNA1069776_S_NODE_1877_length_512_cov_13.582090_g1577_i0 | PRJNA1069776 | 1877 | 512 | 13.582090000000001 | 69.5403008 | Pestivirus bovis | 3052619 | Viruses | Viruses | 761 | 0 | NTclustered | gi|2666910701|gb|PP213451.1| | 981676 | g1577 | i0 | 93.542 | 99.55859375 | 511 | 33 | 99 | 0 | 1 | 511 | 10097 | 9587 | Bovine viral diarrhea virus 1b strain BJ-11, complete genome | blastn | 50974 | 761 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 20585707 | 20585707 | PRJNA1069776_S_NODE_22517_length_223_cov_4.405556_g22203_i0 | PRJNA1069776 | 22517 | 223 | 4.405556 | 9.82438988 | Pestivirus bovis | 3052619 | Viruses | Viruses | 337 | 4.88e-88 | NTclustered | gi|1771880388|emb|LR699803.1| | 11099 | g22203 | i0 | 94.118 | 47.3766816143498 | 221 | 13 | 99 | 0 | 3 | 223 | 1778 | 1558 | bovine viral diarrhea virus polyprotein gene for polyprotein, Npro, C, E1, E2, p7, NS2, NS3, NS4A, NS4B, NS5A, NS5B region | blastn | 10565 | 337 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 21416833 | 21416833 | PRJNA1069776_S_NODE_5597_length_362_cov_18.153605_g5283_i0 | PRJNA1069776 | 5597 | 362 | 18.153605 | 65.7160501 | Pestivirus | 11095 | Viruses | Viruses | 592 | 1.6399999999999999e-164 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g5283 | i0 | 96.133 | 99.6850828729282 | 362 | 14 | 100 | 0 | 1 | 362 | 8333 | 7972 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 36086 | 592 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 21416836 | 21416836 | PRJNA1069776_S_NODE_6137_length_353_cov_40.441935_g5823_i0 | PRJNA1069776 | 6137 | 353 | 40.441935 | 142.76003055 | Pestivirus | 11095 | Viruses | Viruses | 619 | 7.299999999999999e-173 | NTclustered | gi|2618371112|gb|OR753412.1| | 11099 | g5823 | i0 | 98.3 | 94.2266288951841 | 353 | 6 | 100 | 0 | 1 | 353 | 388 | 36 | Bovine viral diarrhea virus 1 isolate BI-2023, complete genome | blastn | 33262 | 619 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 21861533 | 21861533 | PRJNA1069776_S_NODE_23598_length_219_cov_2.937500_g23284_i0 | PRJNA1069776 | 23598 | 219 | 2.9375 | 6.433125 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 56.5 | 0.001 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g23284 | i0 | 100 | 0.136986301369863 | 30 | 0 | 14 | 0 | 1 | 30 | 8 | 37 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 30 | 56.5 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 21861711 | 21861711 | PRJNA1069776_S_NODE_37438_length_178_cov_3.555556_g37124_i0 | PRJNA1069776 | 37438 | 178 | 3.555556 | 6.32888968 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 54.7 | 0.004 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g37124 | i0 | 100 | 0.792134831460674 | 29 | 0 | 16 | 0 | 1 | 29 | 13 | 41 | Carnation latent virus isolate KL, complete genome | blastn | 141 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 22691653 | 22691653 | PRJNA1069776_S_NODE_8738_length_320_cov_5.480144_g8424_i0 | PRJNA1069776 | 8738 | 320 | 5.480144 | 17.5364608 | Pestivirus | 11095 | Viruses | Viruses | 486 | 6.939999999999998e-133 | NTclustered | gi|3786377|gb|AF039172.1|AF039172 | 11096 | g8424 | i0 | 97.872 | 85.23125 | 282 | 5 | 88 | 1 | 39 | 320 | 76 | 356 | Pestivirus type 2 strain BVDV23025 5' untranslated region | blastn | 27274 | 490 | 0.991836734693878 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus suis | ||
| 23136849 | 23136849 | PRJNA1069776_S_NODE_12279_length_286_cov_3.032922_g11965_i0 | PRJNA1069776 | 12279 | 286 | 3.032922 | 8.67415692 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 58.4 | 5.68e-4 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g11965 | i0 | 100 | 0.108391608391608 | 31 | 0 | 11 | 0 | 1 | 31 | 15 | 45 | Carnation latent virus isolate KL, complete genome | blastn | 31 | 58.4 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 23136854 | 23136854 | PRJNA1069776_S_NODE_12519_length_283_cov_9.962500_g12205_i0 | PRJNA1069776 | 12519 | 283 | 9.9625 | 28.193875 | Pestivirus bovis | 3052619 | Viruses | Viruses | 411 | 3.739999999999999e-110 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g12205 | i0 | 98.291 | 96.8268551236749 | 234 | 4 | 100 | 0 | 1 | 234 | 10379 | 10146 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 27402 | 411 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 23136881 | 23136881 | PRJNA1069776_S_NODE_1399_length_579_cov_14.061567_g1120_i0 | PRJNA1069776 | 1399 | 579 | 14.061567 | 81.41647293 | Pestivirus bovis | 3052619 | Viruses | Viruses | 900 | 0 | NTclustered | gi|378753668|gb|JN380088.1| | 981676 | g1120 | i0 | 95.398 | 97.8721934369603 | 565 | 26 | 98 | 0 | 15 | 579 | 9768 | 9204 | Bovine viral diarrhea virus type 1b strain PJ polyprotein gene, complete cds | blastn | 56668 | 900 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 23137200 | 23137200 | PRJNA1069776_S_NODE_37939_length_177_cov_3.291045_g37625_i0 | PRJNA1069776 | 37939 | 177 | 3.291045 | 5.82514965 | Pestivirus bovis | 3052619 | Viruses | Viruses | 278 | 2.27e-70 | NTclustered | gi|2127986428|gb|MW732738.1| | 11099 | g37625 | i0 | 94.915 | 99.9491525423729 | 177 | 9 | 100 | 0 | 1 | 177 | 10939 | 10763 | Bovine viral diarrhea virus 1 strain PI407, complete genome | blastn | 17691 | 278 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 23137398 | 23137398 | PRJNA1069776_S_NODE_6419_length_349_cov_6.542484_g6105_i0 | PRJNA1069776 | 6419 | 349 | 6.542484 | 22.83326916 | Pestivirus tauri | 3052626 | Viruses | Viruses | 640 | 5.529999999999999e-179 | NTclustered | gi|1540352867|gb|MH231125.1| | 54315 | g6105 | i0 | 99.713 | 99.8252148997135 | 349 | 1 | 100 | 0 | 1 | 349 | 4907 | 4559 | Bovine viral diarrhea virus 2 isolate 2139 polyprotein gene, complete cds | blastn | 34839 | 640 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 23966977 | 23966977 | PRJNA1069776_S_NODE_1539_length_558_cov_14.708738_g1252_i0 | PRJNA1069776 | 1539 | 558 | 14.708738 | 82.07475804 | Pestivirus | 11095 | Viruses | Viruses | 830 | 0 | NTclustered | gi|2731951075|gb|PP770551.1| | 11099 | g1252 | i0 | 96.071 | 97.3494623655914 | 509 | 20 | 100 | 0 | 1 | 509 | 10654 | 10146 | Bovine viral diarrhea virus 1 isolate YN2-11/2023, complete genome | blastn | 54321 | 830 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 23966980 | 23966980 | PRJNA1069776_S_NODE_1599_length_549_cov_78.237154_g1309_i0 | PRJNA1069776 | 1599 | 549 | 78.237154 | 429.52197546 | Pestivirus | 11095 | Viruses | Viruses | 926 | 0 | NTclustered | gi|530291193|gb|KC963967.1| | 11099 | g1309 | i0 | 97.086 | 100.897996357013 | 549 | 16 | 100 | 0 | 1 | 549 | 481 | 1029 | Bovine viral diarrhea virus 1 isolate 12F004, complete genome | blastn | 55393 | 926 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 24410391 | 24410391 | PRJNA1069776_S_NODE_10840_length_299_cov_2.621094_g10526_i0 | PRJNA1069776 | 10840 | 299 | 2.621094 | 7.83707106 | Pestivirus tauri | 3052626 | Viruses | Viruses | 525 | 1.3599999999999994e-144 | NTclustered | gi|1540352891|gb|MH231137.1| | 54315 | g10526 | i0 | 98.328 | 99.4280936454849 | 299 | 5 | 100 | 0 | 1 | 299 | 3167 | 3465 | Bovine viral diarrhea virus 2 isolate MadSpl polyprotein gene, complete cds | blastn | 29729 | 525 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 24410420 | 24410420 | PRJNA1069776_S_NODE_12560_length_283_cov_4.433333_g12246_i0 | PRJNA1069776 | 12560 | 283 | 4.433333 | 12.54633239 | Pestivirus tauri | 3052626 | Viruses | Viruses | 468 | 2.19e-127 | NTclustered | gi|1751376243|gb|MK599227.1| | 54315 | g12246 | i0 | 96.466 | 98.0600706713781 | 283 | 10 | 100 | 0 | 1 | 283 | 786 | 504 | Bovine viral diarrhea virus 2 strain SD-1 polyprotein gene, complete cds | blastn | 27751 | 468 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus tauri | ||
| 24410530 | 24410530 | PRJNA1069776_S_NODE_20080_length_235_cov_2.109375_g19766_i0 | PRJNA1069776 | 20080 | 235 | 2.109375 | 4.95703125 | Carlavirus latensdianthi | 3427766 | Viruses | Viruses | 56.5 | 0.002 | NTclustered | gi|1995060321|gb|MN450069.1| | 12164 | g19766 | i0 | 97.059 | 0.621276595744681 | 34 | 0 | 14 | 1 | 202 | 235 | 45 | 13 | Carnation latent virus isolate KL, complete genome | blastn | 146 | 56.5 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Carlavirus | Carlavirus latensdianthi | ||
| 24410610 | 24410610 | PRJNA1069776_S_NODE_2640_length_451_cov_4.750000_g2327_i0 | PRJNA1069776 | 2640 | 451 | 4.75 | 21.4225 | Pestivirus bovis | 3052619 | Viruses | Viruses | 656 | 0 | NTclustered | gi|1248821481|emb|LT907991.1| | 11099 | g2327 | i0 | 92.905 | 61.8847006651885 | 451 | 32 | 100 | 0 | 1 | 451 | 9229 | 8779 | Bovine viral diarrhea virus 1 isolate VE_138cp_05 genome assembly, complete genome: monopartite | blastn | 27910 | 656 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 24410671 | 24410671 | PRJNA1069776_S_NODE_3060_length_431_cov_18.177835_g2747_i0 | PRJNA1069776 | 3060 | 431 | 18.177835 | 78.34646885 | Pestivirus bovis | 3052619 | Viruses | Viruses | 675 | 0 | NTclustered | gi|1350888790|gb|KY852366.1| | 11099 | g2747 | i0 | 95.704 | 97.2343387470998 | 419 | 18 | 97 | 0 | 1 | 419 | 23 | 441 | Bovine viral diarrhea virus 1 isolate S1118 E2 glycoprotein gene, partial cds | blastn | 41908 | 675 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 24410744 | 24410744 | PRJNA1069776_S_NODE_36180_length_181_cov_3.065217_g35866_i0 | PRJNA1069776 | 36180 | 181 | 3.065217 | 5.54804277 | Jujube closterovirus 1 | 3043313 | Viruses | Viruses | 54.7 | 0.004 | NTclustered | gi|2496749738|gb|OP673405.1| | 3043313 | g35866 | i0 | 100 | 0.314917127071823 | 29 | 0 | 16 | 0 | 153 | 181 | 34 | 6 | Jujube closterovirus 1 isolate AKS15-20, complete genome | blastn | 57 | 54.7 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Closteroviridae | Jujube closterovirus 1 | |||
| 24410970 | 24410970 | PRJNA1069776_S_NODE_5860_length_358_cov_7.285714_g5546_i0 | PRJNA1069776 | 5860 | 358 | 7.285714 | 26.08285612 | Pestivirus bovis | 3052619 | Viruses | Viruses | 542 | 1.6499999999999999e-149 | NTclustered | gi|2587731844|gb|OR620202.1| | 11099 | g5546 | i0 | 94.101 | 99.9385474860335 | 356 | 21 | 99 | 0 | 1 | 356 | 11752 | 11397 | Bovine viral diarrhea virus 1 strain 754UYAFA4/112015, partial genome | blastn | 35778 | 542 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 24411002 | 24411002 | PRJNA1069776_S_NODE_7880_length_330_cov_8.003484_g7566_i0 | PRJNA1069776 | 7880 | 330 | 8.003484 | 26.4114972 | Pestivirus bovis | 3052619 | Viruses | Viruses | 549 | 9.039999999999996e-152 | NTclustered | gi|1540352923|gb|MH231153.1| | 11099 | g7566 | i0 | 96.667 | 99.9454545454546 | 330 | 11 | 100 | 0 | 1 | 330 | 5270 | 5599 | Bovine viral diarrhea virus 1 isolate Nebraska polyprotein gene, complete cds | blastn | 32982 | 549 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis | ||
| 25240854 | 25240854 | PRJNA1069776_S_NODE_2480_length_461_cov_81.452153_g2167_i0 | PRJNA1069776 | 2480 | 461 | 81.452153 | 375.49442533 | Pestivirus | 11095 | Viruses | Viruses | 774 | 0 | NTclustered | gi|77799875|dbj|AB111961.2| | 233883 | g2167 | i0 | 96.963 | 99.9696312364425 | 461 | 14 | 100 | 0 | 1 | 461 | 1076 | 616 | Bovine viral diarrhea virus 799ncp gene for poryprotein, partai cds, strain: 799ncp | blastn | 46086 | 774 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Flasuviricetes | Amarillovirales | Flaviviridae | Pestivirus | Pestivirus bovis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;