RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1069776", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1069776 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16761639 16761639 PRJNA1069776_S_NODE_27054_length_206_cov_3.343558_g26740_i0 PRJNA1069776 27054 206 3.343558 6.88772948 Diadema antillarum 105358 Echinodermata other_Eukaryota 52.8 0.018   NTclustered gi|2919540920|ref|XM_071620858.1| 105358 g26740 i0 100 0.135922330097087 28 0 14 0 50 77 1201 1228 PREDICTED: Diadema antillarum uncharacterized protein (LOC139708894), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
31828703 31828703 PRJNA1069776_S_NODE_11937_length_289_cov_2.731707_g11623_i0 PRJNA1069776 11937 289 2.731707 7.89463323 Metazoa 33208 Echinodermata other_Eukaryota 79.3 8.85e-15   NR XP_041472642.1 7654 g11623 i0 39.2 6.09342560553633 79 48 82 0 239 3 921 999 XP_041472642.1 uncharacterized protein K02A2.6-like [Lytechinus variegatus] diamond 1761 79.7 0.994981179422836 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;