RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1069776", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 4 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 4 ✖

bioproject 1

  • PRJNA1069776 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28109490 28109490 PRJNA1069776_S_NODE_16025_length_258_cov_3.525581_g15711_i0 PRJNA1069776 16025 258 3.525581 9.09599898 Planctomycetota bacterium 2026780 Bacteria Bacteria 47 0.00137   NR MEL7337588.1 2026780 g15711 i0 50 0.488372093023256 42 21 48.8 0 11 136 36 77 MEL7337588.1 HTTM domain-containing protein [Planctomycetota bacterium] diamond 126 47 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31552963 31552963 PRJNA1069776_S_NODE_15336_length_262_cov_4.557078_g15022_i0 PRJNA1069776 15336 262 4.557078 11.93954436 Phycisphaerae bacterium SM23_33 1703412 Bacteria Bacteria 46.6 0.00191   NR KPK80200.1 1703412 g15022 i0 37.7 0.698473282442748 61 34 69.8 2 254 72 124 180 KPK80200.1 MAG: hypothetical protein AMJ81_12360 [Phycisphaerae bacterium SM23_33] diamond 183 46.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium SM23_33
31900653 31900653 PRJNA1069776_S_NODE_33697_length_187_cov_3.263889_g33383_i0 PRJNA1069776 33697 187 3.263889 6.10347243 Pirellulales bacterium 2715253 Bacteria Bacteria 42.4 0.0247   NR HUY31662.1 2715253 g33383 i0 47.5 0.641711229946524 40 21 64.2 0 61 180 115 154 HUY31662.1 hypothetical protein [Pirellulales bacterium] diamond 120 42.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales     Pirellulales bacterium
31932176 31932176 PRJNA1069776_S_NODE_40877_length_171_cov_3.875000_g40563_i0 PRJNA1069776 40877 171 3.875 6.62625 Phycisphaerae bacterium 2026778 Bacteria Bacteria 41.2 0.05   NR MAV54538.1 2026778 g40563 i0 40.5 0.649122807017544 37 22 64.9 0 152 42 260 296 MAV54538.1 ATP-dependent RNA helicase HrpA [Phycisphaerae bacterium] diamond 111 41.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;