RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1069776", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1069776 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11663711 11663711 PRJNA1069776_S_NODE_6270_length_351_cov_15.912338_g5956_i0 PRJNA1069776 6270 351 15.912338 55.85230638 Eunicella cavolini 317547 Cnidaria other_Eukaryota 52.8 0.033   NTclustered gi|2918369563|emb|OZ237729.1| 317547 g5956 i0 100 0.0797720797720798 28 0 8 0 59 86 11168077 11168050 Eunicella cavolini genome assembly, chromosome: 13 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
20585646 20585646 PRJNA1069776_S_NODE_18137_length_245_cov_4.128713_g17823_i0 PRJNA1069776 18137 245 4.128713 10.11534685 Orbicella faveolata 48498 Cnidaria other_Eukaryota 54.7 0.006   NTclustered gi|1176086974|ref|XM_020758131.1| 48498 g17823 i0 100 0.118367346938776 29 0 12 0 213 241 24 52 PREDICTED: Orbicella faveolata solute carrier organic anion transporter family member 4A1-like (LOC110052013), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;