RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1068830" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1068830 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29341105 29341105 PRJNA1068830_P_NODE_69829_length_258_cov_1.264865_g69126_i0 PRJNA1068830 69829 258 1.264865 3.2633517 Thermoplasmatota archaeon 2806419 Archaea Archaea 68.9 2.57e-11   NR MBU3902331.1 2806419 g69126 i0 46.3 1.91860465116279 82 42 95.3 1 254 9 220 299 MBU3902331.1 CTP synthase (glutamine hydrolyzing) [Thermoplasmatota archaeon] diamond 495 68.9 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32753997 32753997 PRJNA1068830_P_NODE_40520_length_349_cov_1.807971_g39817_i0 PRJNA1068830 40520 349 1.807971 6.30981879 Thermoplasmata archaeon 1906666 Archaea Archaea 61.6 1.1e-9   NR RLF66471.1 1906666 g39817 i0 64.9 0.318051575931232 37 13 31.8 0 127 17 2 38 RLF66471.1 MAG: hypothetical protein DRN30_02075 [Thermoplasmata archaeon] diamond 111 61.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;