RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1068830" and tax_phylum = "Preaxostyla"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1068830 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12935998 12935998 PRJNA1068830_P_NODE_18171_length_565_cov_1.481707_g17478_i0 PRJNA1068830 18171 565 1.481707 8.37164455 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 60.2 3.33e-4   NTclustered gi|2794946002|ref|XM_067874136.1| 2049356 g17478 i0 90.909 0.0778761061946903 44 4 8 0 260 303 1642 1685 Monocercomonoides exilis uncharacterized protein (MONOS_4092), partial mRNA blastn 44 60.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
19309422 19309422 PRJNA1068830_P_NODE_83996_length_245_cov_0.906977_g83293_i0 PRJNA1068830 83996 245 0.906977 2.22209365 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 114 3.05e-30   NR KAJ4458621.1 342808 g83293 i0 67.1 2.77959183673469 79 26 96.7 0 237 1 2 80 KAJ4458621.1 putative 40S ribosomal protein S16-1 [Paratrimastix pyriformis] diamond 681 114 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;