RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1068830" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1068830 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1457085 1457085 PRJNA1068830_P_NODE_2602_length_1532_cov_22.041809_g2338_i0 PRJNA1068830 2602 1532 22.041809 337.68051388 Opisthokonta 33154 Porifera other_Eukaryota 551 7.4e-191   NR AQM52339.1 121494 g2338 i0 58.6 25.9680156657963 457 175 89.1 5 1514 150 1 445 AQM52339.1 elongation factor 1 alpha, partial [Oscarella lobularis] diamond 39783 556 0.991007194244604 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
9110144 9110144 PRJNA1068830_P_NODE_35508_length_377_cov_2.049342_g34805_i0 PRJNA1068830 35508 377 2.049342 7.72601934 Sycon ciliatum 27933 Porifera other_Eukaryota 52.8 0.036   NTclustered gi|2732921170|ref|XM_065327437.1| 27933 g34805 i0 100 0.148541114058355 28 0 7 0 318 345 38 11 PREDICTED: Sycon ciliatum intraflagellar transport protein 25 homolog (LOC135814331), transcript variant X1, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
28962359 28962359 PRJNA1068830_P_NODE_57828_length_286_cov_1.464789_g57125_i0 PRJNA1068830 57828 286 1.464789 4.18929654 Oscarella lobularis 121494 Porifera other_Eukaryota 105 4.43e-26   NR XP_065829973.1 121494 g57125 i0 62.5 11.2132867132867 72 27 75.5 0 1 216 83 154 XP_065829973.1 ubiquitin-conjugating enzyme E2 H-like isoform X2 [Oscarella lobularis] diamond 3207 105 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
31109825 31109825 PRJNA1068830_P_NODE_78855_length_248_cov_2.674286_g78152_i0 PRJNA1068830 78855 248 2.674286 6.63222928 Geodia barretti 519541 Porifera other_Eukaryota 86.7 1.87e-19   NR CAI8007016.1 519541 g78152 i0 52.7 1.69354838709677 74 35 89.5 0 246 25 65 138 CAI8007016.1 Casein kinase II subunit beta [Geodia barretti] diamond 420 86.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Geodiidae Geodia Geodia barretti
31932154 31932154 PRJNA1068830_P_NODE_76477_length_250_cov_0.909605_g75774_i0 PRJNA1068830 76477 250 0.909605 2.2740125 Oscarella lobularis 121494 Porifera other_Eukaryota 97.1 7.33e-22   NR XP_065843521.1 121494 g75774 i0 51.3 0.936 78 31 85.2 1 3 215 136 213 XP_065843521.1 cathepsin B-like cysteine proteinase 3 [Oscarella lobularis] diamond 234 97.1 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
32808532 32808532 PRJNA1068830_P_NODE_90080_length_232_cov_3.364780_g89377_i0 PRJNA1068830 90080 232 3.36478 7.8062896 Metazoa 33208 Porifera other_Eukaryota 55.8 7.6e-7   NR XP_065832864.1 121494 g89377 i0 36.2 2.68965517241379 69 43 89.2 1 4 210 294 361 XP_065832864.1 solute carrier family 35 member F6-like [Oscarella lobularis] diamond 624 56.2 0.99288256227758 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
32816953 32816953 PRJNA1068830_P_NODE_53160_length_299_cov_2.061947_g52457_i0 PRJNA1068830 53160 299 2.061947 6.16522153 Oopsacas minuta 111878 Porifera other_Eukaryota 48.1 1.44e-4   NR KAI6651473.1 111878 g52457 i0 35.5 0.762541806020067 76 44 71.2 1 67 279 21 96 KAI6651473.1 hypothetical protein LOD99_5081 [Oopsacas minuta] diamond 228 48.1 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Oopsacas Oopsacas minuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;