RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1068830" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1068830 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20140491 20140491 PRJNA1068830_P_NODE_17396_length_579_cov_2.691700_g16706_i0 PRJNA1068830 17396 579 2.6917 15.584943 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.004   NTclustered gi|290984283|ref|XM_002674811.1| 5762 g16706 i0 92.308 0.338514680483592 39 3 7 0 426 464 52 90 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_50624), partial mRNA blastn 196 56.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30785579 30785579 PRJNA1068830_P_NODE_65374_length_268_cov_1.569231_g64671_i0 PRJNA1068830 65374 268 1.569231 4.20553908 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 81.6 9.92e-17   NR KAL0477274.1 1008807 g64671 i0 45.3 1.82462686567164 86 46 96.3 1 264 7 106 190 KAL0477274.1 Ras-related protein Rab [Acrasis kona] diamond 489 82.4 0.990291262135922 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31236269 31236269 PRJNA1068830_P_NODE_46175_length_324_cov_1.239044_g45472_i0 PRJNA1068830 46175 324 1.239044 4.01450256 Acrasis kona 1008807 Heterolobosea other_Eukaryota 90.1 1.06e-20   NR KAL0490923.1 1008807 g45472 i0 50.5 1.7037037037037 91 34 84.3 1 292 20 13 92 KAL0490923.1 ribosomal protein S20 [Acrasis kona] diamond 552 90.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;