RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1068830", tax_phylum = "Cossaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Cossaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1068830 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27636111 27636111 PRJNA1068830_P_NODE_15864_length_612_cov_2.578850_g15181_i0 PRJNA1068830 15864 612 2.57885 15.782562 Parvovirus grus5877 3117099 Viruses Viruses 137 9.049999999999999e-35   NR DBA48660.1 3117099 g15181 i0 57.9 0.558823529411765 114 48 55.9 0 612 271 294 407 DBA48660.1 MAG TPA_asm: NS1 [Parvovirus grus5877] diamond 342 137 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus grus5877
30415220 30415220 PRJNA1068830_P_NODE_23713_length_482_cov_2.638142_g23012_i0 PRJNA1068830 23713 482 2.638142 12.71584444 Galliform chaphamaparvovirus 12 2928880 Viruses Viruses 56.6 8.33e-7   NR UOH27061.1 2928880 g23012 i0 32.3 3.02489626556017 124 81 75.9 3 396 31 16 138 UOH27061.1 nonstructural protein 3 [Galliform chaphamaparvovirus 12] diamond 1458 56.6 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Chaphamaparvovirus Galliform chaphamaparvovirus 12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;