RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1068830" and tax_phylum = "Candidatus Parcubacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1068830 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29341093 29341093 PRJNA1068830_P_NODE_45189_length_328_cov_1.482353_g44486_i0 PRJNA1068830 45189 328 1.482353 4.86211784 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 195 2.2000000000000008e-59   NR RMD61734.1 2762014 g44486 i0 88.9 0.98780487804878 108 12 98.8 0 326 3 119 226 RMD61734.1 MAG: N4-gp56 family major capsid protein [Candidatus Parcubacteria bacterium] diamond 324 195 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
31268050 31268050 PRJNA1068830_P_NODE_62975_length_274_cov_0.940299_g62272_i0 PRJNA1068830 62975 274 0.940299 2.57641926 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 145 2.39e-40   NR RMD61734.1 2762014 g62272 i0 81.9 0.908759124087591 83 15 90.9 0 249 1 1 83 RMD61734.1 MAG: N4-gp56 family major capsid protein [Candidatus Parcubacteria bacterium] diamond 249 145 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;