RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1068830" and tax_phylum = "Bryozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1068830 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9110351 9110351 PRJNA1068830_P_NODE_43988_length_333_cov_1.715385_g43285_i0 PRJNA1068830 43988 333 1.715385 5.71223205 Plumatella sp. ZHY-2005 365321 Bryozoa other_Eukaryota 329 1.29e-85   NTclustered gi|90992874|gb|DQ333339.1| 365321 g43285 i0 85.67 37.7477477477477 321 37 96 9 11 330 1 313 Plumatella sp. ZHY-2005 28S ribosomal RNA gene, partial sequence blastn 12570 329 1 Eukaryota Opisthokonta Metazoa Bryozoa Phylactolaemata   Plumatellidae Plumatella Plumatella sp. ZHY-2005
9110723 9110723 PRJNA1068830_P_NODE_58148_length_285_cov_2.061321_g57445_i0 PRJNA1068830 58148 285 2.061321 5.87476485 Watersipora subatra 2589382 Bryozoa other_Eukaryota 90.9 6.38e-19   NR XP_067949379.1 2589382 g57445 i0 43.5 4.76842105263158 92 45 96.8 1 277 2 311 395 XP_067949379.1 serine/threonine-protein kinase PAK 1-like [Watersipora subatra] diamond 1359 90.9 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Watersiporidae Watersipora Watersipora subatra
27880174 27880174 PRJNA1068830_P_NODE_83605_length_245_cov_0.906977_g82902_i0 PRJNA1068830 83605 245 0.906977 2.22209365 Metazoa 33208 Bryozoa other_Eukaryota 42.7 0.0388   NR KAF6025003.1 10212 g82902 i0 48.6 0.930612244897959 37 19 45.3 0 117 227 893 929 KAF6025003.1 SNX14 [Bugula neritina] diamond 228 42.7 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Bugulidae Bugula Bugula neritina
28141446 28141446 PRJNA1068830_P_NODE_69465_length_259_cov_1.032258_g68762_i0 PRJNA1068830 69465 259 1.032258 2.67354822 Watersipora subatra 2589382 Bryozoa other_Eukaryota 58.2 1.59e-7   NR XP_067940328.1 2589382 g68762 i0 40.3 1.43629343629344 62 37 71.8 0 257 72 128 189 XP_067940328.1 uncharacterized protein [Watersipora subatra] diamond 372 58.2 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Watersiporidae Watersipora Watersipora subatra
29877895 29877895 PRJNA1068830_P_NODE_35551_length_377_cov_1.536184_g34848_i0 PRJNA1068830 35551 377 1.536184 5.79141368 Bugula neritina 10212 Bryozoa other_Eukaryota 178 1.27e-51   NR KAF6026996.1 10212 g34848 i0 62.9 0.986737400530504 124 42 98.7 1 6 377 108 227 KAF6026996.1 NAGA [Bugula neritina] diamond 372 178 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Bugulidae Bugula Bugula neritina
31512792 31512792 PRJNA1068830_P_NODE_51456_length_305_cov_1.284483_g50753_i0 PRJNA1068830 51456 305 1.284483 3.91767315 Metazoa 33208 Bryozoa other_Eukaryota 124 1.3e-30   NR XP_067928311.1 2589382 g50753 i0 58.8 3.02950819672131 102 40 98.4 1 301 2 448 549 XP_067928311.1 plastin-1-like [Watersipora subatra] diamond 924 124 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Watersiporidae Watersipora Watersipora subatra

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;