RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1068830" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1068830 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23135028 23135028 PRJNA1068830_P_NODE_40119_length_351_cov_1.676259_g39416_i0 PRJNA1068830 40119 351 1.676259 5.88366909 Bacteria 2 Bacteria Bacteria 153 3.7399999999999997e-42   NR CUU02549.1 1661580 g39416 i0 70.7 8.92307692307692 116 34 99.1 0 348 1 263 378 CUU02549.1 Na+/H+-dicarboxylate symporter [Armatimonadetes bacterium GBS] diamond 3132 153 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium GBS
30857177 30857177 PRJNA1068830_P_NODE_80314_length_247_cov_2.367816_g79611_i0 PRJNA1068830 80314 247 2.367816 5.84850552 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 154 2.0699999999999993e-43   NR MCW5939052.1 2682144 g79611 i0 95.1 0.983805668016194 81 4 98.4 0 3 245 184 264 MCW5939052.1 exo-alpha-sialidase [Fimbriimonadaceae bacterium] diamond 243 154 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;