contig_metadata
12 rows where bioproject = "PRJNA1068830", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10386230 | 10386230 | PRJNA1068830_P_NODE_50589_length_308_cov_1.195745_g49886_i0 | PRJNA1068830 | 50589 | 308 | 1.195745 | 3.6828946 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 115 | 3.62e-21 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g49886 | i0 | 83.871 | 5.81493506493506 | 124 | 17 | 40 | 2 | 21 | 144 | 5928048 | 5928168 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 1791 | 115 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 12493259 | 12493259 | PRJNA1068830_P_NODE_85790_length_244_cov_0.912281_g85087_i0 | PRJNA1068830 | 85790 | 244 | 0.912281 | 2.22596564 | Myxococcaceae | 31 | Bacteria | Bacteria | 435 | 1.87e-117 | NTclustered | gi|545790941|gb|KF270704.1| | 35 | g85087 | i0 | 98.77 | 245.844262295082 | 244 | 3 | 100 | 0 | 1 | 244 | 533 | 290 | Corallococcus macrosporus strain Ccm7 23S ribosomal RNA gene, partial sequence | blastn | 59986 | 435 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus macrosporus | ||
| 21859620 | 21859620 | PRJNA1068830_P_NODE_44878_length_329_cov_1.898438_g44175_i0 | PRJNA1068830 | 44878 | 329 | 1.898438 | 6.24586102 | Archangium violaceum | 83451 | Bacteria | Bacteria | 403 | 7.419999999999998e-108 | NTclustered | gi|1985695619|gb|CP069396.1| | 83451 | g44175 | i0 | 88.922 | 238.762917933131 | 334 | 28 | 100 | 8 | 1 | 329 | 585142 | 585471 | Archangium violaceum strain SDU8 chromosome, complete genome | blastn | 78553 | 403 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 28015063 | 28015063 | PRJNA1068830_P_NODE_83465_length_245_cov_1.302326_g82762_i0 | PRJNA1068830 | 83465 | 245 | 1.302326 | 3.1906987 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 45.8 | 0.00304 | NR | MBL8616282.1 | 2026735 | g82762 | i0 | 43.6 | 0.673469387755102 | 55 | 29 | 67.3 | 1 | 243 | 79 | 147 | 199 | MBL8616282.1 IPT/TIG domain-containing protein [Deltaproteobacteria bacterium] | diamond | 165 | 45.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 28015064 | 28015064 | PRJNA1068830_P_NODE_85605_length_244_cov_0.912281_g84902_i0 | PRJNA1068830 | 85605 | 244 | 0.912281 | 2.22596564 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 44.3 | 0.00732 | NR | MDF3070876.1 | 2268199 | g84902 | i0 | 44.7 | 0.467213114754098 | 38 | 21 | 46.7 | 0 | 3 | 116 | 8 | 45 | MDF3070876.1 pth [Polyangiaceae bacterium] | diamond | 114 | 44.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 29214946 | 29214946 | PRJNA1068830_P_NODE_55609_length_292_cov_1.273973_g54906_i0 | PRJNA1068830 | 55609 | 292 | 1.273973 | 3.72000116 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 44.3 | 0.0184 | NR | HEX3765821.1 | 2212474 | g54906 | i0 | 41 | 0.852739726027397 | 83 | 45 | 84.2 | 3 | 42 | 287 | 8 | 87 | HEX3765821.1 polysaccharide deacetylase family protein [Kofleriaceae bacterium] | diamond | 249 | 44.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 29972546 | 29972546 | PRJNA1068830_P_NODE_81491_length_247_cov_0.896552_g80788_i0 | PRJNA1068830 | 81491 | 247 | 0.896552 | 2.21448344 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 49.3 | 1.95e-4 | NR | MBL8683386.1 | 2026763 | g80788 | i0 | 40.4 | 0.692307692307692 | 57 | 32 | 69.2 | 1 | 243 | 73 | 45 | 99 | MBL8683386.1 hypothetical protein [Myxococcales bacterium] | diamond | 171 | 49.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 30035806 | 30035806 | PRJNA1068830_P_NODE_70711_length_256_cov_1.300546_g70008_i0 | PRJNA1068830 | 70711 | 256 | 1.300546 | 3.32939776 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 67 | 2.6e-11 | NR | MCP4448234.1 | 2026763 | g70008 | i0 | 43 | 2.0390625 | 86 | 46 | 97.3 | 1 | 3 | 251 | 63 | 148 | MCP4448234.1 hypothetical protein [Myxococcales bacterium] | diamond | 522 | 67 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 30288897 | 30288897 | PRJNA1068830_P_NODE_53892_length_297_cov_1.620536_g53189_i0 | PRJNA1068830 | 53892 | 297 | 1.620536 | 4.81299192 | Cystobacter fuscus | 43 | Bacteria | Bacteria | 66.6 | 2.88e-10 | NR | WP_095988725.1 | 43 | g53189 | i0 | 46.7 | 2.70707070707071 | 60 | 32 | 60.6 | 0 | 118 | 297 | 431 | 490 | WP_095988725.1 multicopper oxidase family protein [Cystobacter fuscus] | diamond | 804 | 66.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 30793943 | 30793943 | PRJNA1068830_P_NODE_82114_length_246_cov_0.901734_g81411_i0 | PRJNA1068830 | 82114 | 246 | 0.901734 | 2.21826564 | Archangium gephyra | 48 | Bacteria | Bacteria | 153 | 2.14e-42 | NR | PZR13889.1 | 48 | g81411 | i0 | 91.4 | 0.98780487804878 | 81 | 7 | 98.8 | 0 | 3 | 245 | 370 | 450 | PZR13889.1 MAG: NADH-quinone oxidoreductase subunit H [Archangium gephyra] | diamond | 243 | 153 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 31109822 | 31109822 | PRJNA1068830_P_NODE_69095_length_259_cov_2.494624_g68392_i0 | PRJNA1068830 | 69095 | 259 | 2.494624 | 6.46107616 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 42.7 | 0.0414 | NR | MBK7586224.1 | 2026763 | g68392 | i0 | 25.3 | 0.868725868725869 | 75 | 56 | 86.9 | 0 | 257 | 33 | 52 | 126 | MBK7586224.1 PEGA domain-containing protein [Myxococcales bacterium] | diamond | 225 | 42.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 31457935 | 31457935 | PRJNA1068830_P_NODE_62156_length_276_cov_1.093596_g61453_i0 | PRJNA1068830 | 62156 | 276 | 1.093596 | 3.01832496 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 50.4 | 1.06e-4 | NR | NUP12796.1 | 2268199 | g61453 | i0 | 51.1 | 0.489130434782609 | 45 | 20 | 46.7 | 1 | 130 | 2 | 157 | 201 | NUP12796.1 hypothetical protein [Polyangiaceae bacterium] | diamond | 135 | 50.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;