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contig_metadata

18 rows where bioproject = "PRJNA1068830", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 18 ✖

tax_kingdom 1

  • Pseudomonadati · 18 ✖

bioproject 1

  • PRJNA1068830 · 18 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
183052 183052 PRJNA1068830_P_NODE_52541_length_301_cov_1.824561_g51838_i0 PRJNA1068830 52541 301 1.824561 5.49192861 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 556 4.87e-154   NTclustered gi|341941922|gb|JN225540.1| 171953 g51838 i0 100 99.8870431893688 301 0 100 0 1 301 639 339 Uncultured Acidobacteria bacterium clone GSY-XJ5 16S ribosomal RNA gene, partial sequence blastn 30066 556 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
183192 183192 PRJNA1068830_P_NODE_58541_length_284_cov_2.213270_g57838_i0 PRJNA1068830 58541 284 2.21327 6.2856868 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 399 8.129999999999998e-107   NTclustered gi|2874253885|emb|OY970060.1| 171953 g57838 i0 94.318 97.4330985915493 264 9 92 5 23 284 4839641 4839900 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 blastn 27671 399 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
26624091 26624091 PRJNA1068830_P_NODE_50101_length_309_cov_2.546610_g49398_i0 PRJNA1068830 50101 309 2.54661 7.8690249 Candidatus Angelobacter sp. 2976921 Bacteria Bacteria 43.9 0.0305   NR HET9791579.1 2976921 g49398 i0 31.6 0.766990291262136 79 43 69.9 2 234 19 18 92 HET9791579.1 aspartyl protease family protein [Candidatus Angelobacter sp.] diamond 237 43.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia     Candidatus Angelobacter Candidatus Angelobacter sp.
26655573 26655573 PRJNA1068830_P_NODE_62861_length_274_cov_1.402985_g62158_i0 PRJNA1068830 62861 274 1.402985 3.8441789 Acidobacteriota bacterium 1978231 Bacteria Bacteria 69.7 1.75e-11   NR MBX3294083.1 1978231 g62158 i0 44.3 0.963503649635037 88 47 96.4 1 7 270 153 238 MBX3294083.1 hypothetical protein [Acidobacteriota bacterium] diamond 264 69.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26782689 26782689 PRJNA1068830_P_NODE_62621_length_274_cov_2.975124_g61918_i0 PRJNA1068830 62621 274 2.975124 8.15183976 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.5 0.018   NR MEA2563057.1 1978231 g61918 i0 42.9 0.613138686131387 56 31 60.2 1 56 220 18 73 MEA2563057.1 hypothetical protein [Acidobacteriota bacterium] diamond 168 43.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27817214 27817214 PRJNA1068830_P_NODE_74484_length_252_cov_0.871508_g73781_i0 PRJNA1068830 74484 252 0.871508 2.19620016 Bacteria 2 Bacteria Bacteria 157 2.16e-46   NR MBA2620847.1 1978231 g73781 i0 89.3 3 84 9 100 0 252 1 23 106 MBA2620847.1 amidohydrolase [Acidobacteriota bacterium] diamond 756 157 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27951822 27951822 PRJNA1068830_P_NODE_82805_length_246_cov_0.901734_g82102_i0 PRJNA1068830 82805 246 0.901734 2.21826564 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.1 0.0283   NR MCX6615803.1 1978231 g82102 i0 39.1 0.780487804878049 64 38 78 1 35 226 730 792 MCX6615803.1 BACON domain-containing carbohydrate-binding protein [Acidobacteriota bacterium] diamond 192 43.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28015046 28015046 PRJNA1068830_P_NODE_61205_length_278_cov_1.424390_g60502_i0 PRJNA1068830 61205 278 1.42439 3.9598042 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 43.1 0.0413   NR MEJ7617117.1 2283092 g60502 i0 36 0.928057553956835 86 39 77.7 3 61 276 532 615 MEJ7617117.1 molybdopterin oxidoreductase family protein [Pyrinomonadaceae bacterium] diamond 258 43.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28457057 28457057 PRJNA1068830_P_NODE_49406_length_312_cov_1.305439_g48703_i0 PRJNA1068830 49406 312 1.305439 4.07296968 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 62.4 1.03e-8   NR MEE8523483.1 2651171 g48703 i0 38.7 2.49038461538462 75 36 71.2 3 304 83 243 308 MEE8523483.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 777 62.4 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28827164 28827164 PRJNA1068830_P_NODE_37468_length_366_cov_1.034130_g36765_i0 PRJNA1068830 37468 366 1.03413 3.7849158 Pseudomonadati 3379134 Bacteria Bacteria 86.7 7.92e-18   NR MFB3903155.1 1978231 g36765 i0 54.5 1.31147540983607 77 34 63.1 1 254 24 82 157 MFB3903155.1 DUF542 domain-containing protein [Acidobacteriota bacterium] diamond 480 87.4 0.991990846681922 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29877898 29877898 PRJNA1068830_P_NODE_44551_length_331_cov_1.124031_g43848_i0 PRJNA1068830 44551 331 1.124031 3.72054261 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 144 1.0699999999999998e-41   NR MEN6537328.1 2212468 g43848 i0 65.4 0.969788519637462 107 37 97 0 331 11 30 136 MEN6537328.1 FmdB family zinc ribbon protein [Bryobacteraceae bacterium] diamond 321 144 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
29941126 29941126 PRJNA1068830_P_NODE_58191_length_285_cov_1.830189_g57488_i0 PRJNA1068830 58191 285 1.830189 5.21603865 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 56.2 2.39e-7   NR MCU0239184.1 2283092 g57488 i0 35.4 2.93684210526316 79 44 75.8 1 217 2 8 86 MCU0239184.1 Hsp20/alpha crystallin family protein [Pyrinomonadaceae bacterium] diamond 837 56.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30667638 30667638 PRJNA1068830_P_NODE_69033_length_260_cov_0.855615_g68330_i0 PRJNA1068830 69033 260 0.855615 2.224599 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 42 0.0482   NR HSL83150.1 2651171 g68330 i0 41.1 0.646153846153846 56 33 64.6 0 258 91 84 139 HSL83150.1 FtsX-like permease family protein [Thermoanaerobaculia bacterium] diamond 168 42 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
30952179 30952179 PRJNA1068830_P_NODE_44674_length_330_cov_1.821012_g43971_i0 PRJNA1068830 44674 330 1.821012 6.0093396 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 111 9.5e-27   NR MEN6537327.1 2212468 g43971 i0 52.2 1.04545454545455 115 50 100 1 330 1 117 231 MEN6537327.1 hypothetical protein [Bryobacteraceae bacterium] diamond 345 111 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
31164444 31164444 PRJNA1068830_P_NODE_60935_length_279_cov_0.878641_g60232_i0 PRJNA1068830 60935 279 0.878641 2.45140839 Bacteria 2 Bacteria Bacteria 54.7 3.36e-6   NR MBX3279440.1 1978231 g60232 i0 40.4 1.29032258064516 57 34 61.3 0 181 11 86 142 MBX3279440.1 protein kinase [Acidobacteriota bacterium] diamond 360 54.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31363053 31363053 PRJNA1068830_P_NODE_64136_length_271_cov_1.363636_g63433_i0 PRJNA1068830 64136 271 1.363636 3.69545356 Acidobacteriota bacterium 1978231 Bacteria Bacteria 58.5 1.4e-7   NR MEM8961467.1 1978231 g63433 i0 36.6 0.907749077490775 82 49 87.5 1 9 245 601 682 MEM8961467.1 polyprenyl synthetase family protein [Acidobacteriota bacterium] diamond 246 58.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32343839 32343839 PRJNA1068830_P_NODE_21379_length_513_cov_1.956818_g20678_i0 PRJNA1068830 21379 513 1.956818 10.03847634 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 160 2.24e-42   NR MEN6608653.1 2212468 g20678 i0 51.2 1.00584795321637 172 47 100 5 1 513 116 251 MEN6608653.1 hypothetical protein [Bryobacteraceae bacterium] diamond 516 160 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
32714062 32714062 PRJNA1068830_P_NODE_78260_length_249_cov_0.886364_g77557_i0 PRJNA1068830 78260 249 0.886364 2.20704636 root 1 Root_unresolved Root_unresolved 49.3 3.65e-5   NR MBK6588662.1 1978231 g77557 i0 57.1 2.50602409638554 42 18 50.6 0 6 131 40 81 MBK6588662.1 RNA-binding protein [Acidobacteriota bacterium] diamond 624 49.7 0.991951710261569 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;