RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1068830", tax_kingdom = "Pararnavirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA1068830 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3564686 3564686 PRJNA1068830_P_NODE_34243_length_386_cov_0.987220_g33540_i0 PRJNA1068830 34243 386 0.98722 3.8106692 root 1 Root_unresolved Root_unresolved 712 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g33540 i0 100 27.2901554404145 385 0 99 0 1 385 5869 6253 Moloney murine leukemia virus, complete genome blastn 10534 712 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
7392040 7392040 PRJNA1068830_P_NODE_74706_length_251_cov_2.191011_g74003_i0 PRJNA1068830 74706 251 2.191011 5.49943761 root 1 Root_unresolved Root_unresolved 462 8.869999999999999e-126   NTclustered gi|61630|emb|X01811.1| 11757 g74003 i0 100 32.609561752988 250 0 99 0 2 251 445 196 Mouse mammary tumor virus env gene for envelope glycoprotein blastn 8185 464 0.995689655172414 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus murmamtum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;