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contig_metadata

8 rows where bioproject = "PRJNA1068830" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 8 ✖

bioproject 1

  • PRJNA1068830 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
182669 182669 PRJNA1068830_P_NODE_36201_length_373_cov_1.533333_g35498_i0 PRJNA1068830 36201 373 1.533333 5.71933209 Methanobacteriota archaeon 2026739 Archaea Archaea 182 1.1099999999999999e-54   NR MEK9804820.1 2026739 g35498 i0 68.3 2.07506702412869 126 38 99.7 1 1 372 61 186 MEK9804820.1 thymidylate synthase [Methanobacteriota archaeon] diamond 774 182 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
19309263 19309263 PRJNA1068830_P_NODE_78316_length_249_cov_0.886364_g77613_i0 PRJNA1068830 78316 249 0.886364 2.20704636 root 1 Root_unresolved Root_unresolved 110 4.36e-26   NR MBO7731199.1 66852 g77613 i0 66.3 10 83 28 100 0 1 249 251 333 MBO7731199.1 hypothetical protein [Methanobrevibacter sp.] diamond 2490 110 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
26846115 26846115 PRJNA1068830_P_NODE_78641_length_249_cov_0.886364_g77938_i0 PRJNA1068830 78641 249 0.886364 2.20704636 Methanoculleus sediminis 1550566 Archaea Archaea 44.3 0.0113   NR WP_052959027.1 1550566 g77938 i0 33.8 0.819277108433735 68 45 81.9 0 35 238 391 458 WP_052959027.1 glycoside hydrolase family 15 protein [Methanoculleus sediminis] diamond 204 44.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sediminis
27856941 27856941 PRJNA1068830_P_NODE_66505_length_265_cov_2.031250_g65802_i0 PRJNA1068830 66505 265 2.03125 5.3828125 Methanobacteriota archaeon 2026739 Archaea Archaea 46.6 0.00209   NR MBT05095.1 2026739 g65802 i0 33.3 2.04905660377359 90 53 94 2 250 2 127 216 MBT05095.1 hypothetical protein [Methanobacteriota archaeon] diamond 543 46.6 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29341105 29341105 PRJNA1068830_P_NODE_69829_length_258_cov_1.264865_g69126_i0 PRJNA1068830 69829 258 1.264865 3.2633517 Thermoplasmatota archaeon 2806419 Archaea Archaea 68.9 2.57e-11   NR MBU3902331.1 2806419 g69126 i0 46.3 1.91860465116279 82 42 95.3 1 254 9 220 299 MBU3902331.1 CTP synthase (glutamine hydrolyzing) [Thermoplasmatota archaeon] diamond 495 68.9 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
30604386 30604386 PRJNA1068830_P_NODE_75513_length_251_cov_0.876404_g74810_i0 PRJNA1068830 75513 251 0.876404 2.19977404 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 40 0.0417   NR WP_295622269.1 253161 g74810 i0 46.3 0.49003984063745 41 22 49 0 19 141 7 47 WP_295622269.1 hypothetical protein [uncultured Methanobrevibacter sp.] diamond 123 40 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
30848783 30848783 PRJNA1068830_P_NODE_62574_length_275_cov_0.975248_g61871_i0 PRJNA1068830 62574 275 0.975248 2.681932 root 1 Root_unresolved Root_unresolved 121 8.89e-31   NR WP_295591711.1 66852 g61871 i0 63.7 4.97454545454545 91 30 99.3 1 275 3 18 105 WP_295591711.1 ATP-binding protein [Methanobrevibacter sp.] diamond 1368 121 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32753997 32753997 PRJNA1068830_P_NODE_40520_length_349_cov_1.807971_g39817_i0 PRJNA1068830 40520 349 1.807971 6.30981879 Thermoplasmata archaeon 1906666 Archaea Archaea 61.6 1.1e-9   NR RLF66471.1 1906666 g39817 i0 64.9 0.318051575931232 37 13 31.8 0 127 17 2 38 RLF66471.1 MAG: hypothetical protein DRN30_02075 [Thermoplasmata archaeon] diamond 111 61.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;