RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

19 rows where bioproject = "PRJNA1068830", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 19 ✖

tax_kingdom 1

  • Metazoa · 19 ✖

tax_clade 1

bioproject 1

  • PRJNA1068830 · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5286565 5286565 PRJNA1068830_P_NODE_81825_length_246_cov_1.751445_g81122_i0 PRJNA1068830 81825 246 1.751445 4.3085547 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 435 1.8900000000000003e-117   NTclustered gi|209968685|gb|FJ384848.1| 52061 g81122 i0 99.174 63.8617886178862 242 1 98 1 1 241 253 12 Stenostomum leucops isolate K04_75 28S ribosomal RNA gene, partial sequence blastn 15710 435 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
9109855 9109855 PRJNA1068830_P_NODE_22388_length_499_cov_3.889671_g21687_i0 PRJNA1068830 22388 499 3.889671 19.40945829 Metazoa 33208 Platyhelminthes Platyhelminthes 266 4.78e-85   NR VDL18401.1 6216 g21687 i0 75.2 38.5310621242485 165 41 99.2 0 498 4 200 364 VDL18401.1 unnamed protein product [Hymenolepis diminuta] diamond 19227 267 0.99625468164794 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta
16759257 16759257 PRJNA1068830_P_NODE_24934_length_468_cov_1.751899_g24233_i0 PRJNA1068830 24934 468 1.751899 8.19888732 Metazoa 33208 Platyhelminthes Platyhelminthes 286 9.359999999999998e-94   NR CDS15399.1 6210 g24233 i0 80.1 288.99358974359 156 31 100 0 1 468 98 253 CDS15399.1 serine:threonine protein phosphatase PP1 gamma [Echinococcus granulosus] diamond 135249 286 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
21416241 21416241 PRJNA1068830_P_NODE_53817_length_297_cov_2.075893_g53114_i0 PRJNA1068830 53817 297 2.075893 6.16540221 Metazoa 33208 Platyhelminthes Platyhelminthes 115 3.47e-21   NTclustered gi|15808977|gb|AF418550.1| 6183 g53114 i0 100 0.626262626262626 62 0 21 0 30 91 1859 1798 Schistosoma mansoni albumin precursor, mRNA, complete cds blastn 186 115 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
27596142 27596142 PRJNA1068830_P_NODE_35624_length_376_cov_4.867987_g34921_i0 PRJNA1068830 35624 376 4.867987 18.30363112 Metazoa 33208 Platyhelminthes Platyhelminthes 119 1.92e-29   NR THD23375.1 6192 g34921 i0 46.4 8.07446808510638 125 65 98.9 2 1 372 207 330 THD23375.1 Cathepsin L cysteine proteinase [Fasciola hepatica] diamond 3036 120 0.991666666666667 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
27983290 27983290 PRJNA1068830_P_NODE_64085_length_271_cov_1.505051_g63382_i0 PRJNA1068830 64085 271 1.505051 4.07868821 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 70.9 6.1e-12   NR VZI37571.1 99802 g63382 i0 62.2 0.498154981549816 45 17 49.8 0 271 137 260 304 VZI37571.1 unnamed protein product [Spirometra erinaceieuropaei] diamond 135 70.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
28077945 28077945 PRJNA1068830_P_NODE_67165_length_264_cov_1.277487_g66462_i0 PRJNA1068830 67165 264 1.277487 3.37256568 Schistosoma intercalatum 6187 Platyhelminthes Platyhelminthes 107 1.82e-27   NR CAH8515303.1 6187 g66462 i0 62.7 0.852272727272727 75 28 85.2 0 226 2 1 75 CAH8515303.1 unnamed protein product [Schistosoma intercalatum] diamond 225 107 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma intercalatum
28543465 28543465 PRJNA1068830_P_NODE_86067_length_243_cov_3.370588_g85364_i0 PRJNA1068830 86067 243 3.370588 8.19052884 Metazoa 33208 Platyhelminthes Platyhelminthes 110 2.87e-26   NR PAA93316.1 282301 g85364 i0 68.4 2.88888888888889 76 24 93.8 0 234 7 243 318 PAA93316.1 hypothetical protein BOX15_Mlig013126g2 [Macrostomum lignano] diamond 702 110 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
28732739 28732739 PRJNA1068830_P_NODE_83427_length_245_cov_1.360465_g82724_i0 PRJNA1068830 83427 245 1.360465 3.33313925 Schistosoma 6181 Platyhelminthes Platyhelminthes 81.6 2.13e-16   NR CAH8671007.1 6185 g82724 i0 46.8 3.86938775510204 79 40 96.7 2 243 7 100 176 CAH8671007.1 unnamed protein product [Schistosoma haematobium] diamond 948 82 0.995121951219512 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
28953916 28953916 PRJNA1068830_P_NODE_2068_length_1661_cov_6.251889_g1849_i0 PRJNA1068830 2068 1661 6.251889 103.84387629 Hymenolepididae 6214 Platyhelminthes Platyhelminthes 122 2.82e-28   NR CDS26983.2 85433 g1849 i0 45.3 0.550872968091511 150 73 26 2 18 449 2 148 CDS26983.2 RNA and export factor binding protein 2 [Hymenolepis microstoma] diamond 915 122 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
29120220 29120220 PRJNA1068830_P_NODE_83049_length_245_cov_2.773256_g82346_i0 PRJNA1068830 83049 245 2.773256 6.7944772 Hymenolepis microstoma 85433 Platyhelminthes Platyhelminthes 97.1 2.9e-21   NR CDS26487.1 85433 g82346 i0 56.8 5.5469387755102 81 33 96.7 2 238 2 505 585 CDS26487.1 thioredoxin glutathione reductase [Hymenolepis microstoma] diamond 1359 97.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
29206489 29206489 PRJNA1068830_P_NODE_71349_length_254_cov_4.182320_g70646_i0 PRJNA1068830 71349 254 4.18232 10.6230928 Fasciolidae 27843 Platyhelminthes Platyhelminthes 59.3 2.4e-8   NR THD22600.1 6192 g70646 i0 42.3 1.67716535433071 71 38 80.3 1 207 4 7 77 THD22600.1 Mitochondrial ATP synthase subunit OSCP subunit [Fasciola hepatica] diamond 426 59.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
30067260 30067260 PRJNA1068830_P_NODE_47272_length_319_cov_2.630081_g46569_i0 PRJNA1068830 47272 319 2.630081 8.38995839 Schistosoma turkestanicum 1163369 Platyhelminthes Platyhelminthes 97.4 2e-21   NR CAH8465612.1 1163369 g46569 i0 44.1 0.959247648902821 102 54 93.1 2 10 306 268 369 CAH8465612.1 unnamed protein product [Schistosoma turkestanicum] diamond 306 97.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma turkestanicum
30288886 30288886 PRJNA1068830_P_NODE_28432_length_431_cov_2.145251_g27729_i0 PRJNA1068830 28432 431 2.145251 9.24603181 Calicophoron daubneyi 300641 Platyhelminthes Platyhelminthes 147 6.2e-40   NR CAL5129275.1 300641 g27729 i0 53.3 13.5034802784223 137 63 94.7 1 416 9 5 141 CAL5129275.1 unnamed protein product [Calicophoron daubneyi] diamond 5820 147 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Paramphistomidae Calicophoron Calicophoron daubneyi
31227787 31227787 PRJNA1068830_P_NODE_55015_length_294_cov_0.950226_g54312_i0 PRJNA1068830 55015 294 0.950226 2.79366444 Metazoa 33208 Platyhelminthes Platyhelminthes 121 8.85e-30   NR VUZ56249.1 6216 g54312 i0 63.5 27.2551020408163 96 35 98 0 5 292 208 303 VUZ56249.1 unnamed protein product [Hymenolepis diminuta] diamond 8013 121 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta
31259615 31259615 PRJNA1068830_P_NODE_15275_length_626_cov_2.086799_g14597_i0 PRJNA1068830 15275 626 2.086799 13.06336174 Metazoa 33208 Platyhelminthes Platyhelminthes 153 7.57e-41   NR CAH8476265.1 39320 g14597 i0 38.2 8.38178913738019 199 120 94.9 2 625 32 158 354 CAH8476265.1 unnamed protein product [Heterobilharzia americana] diamond 5247 153 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Heterobilharzia Heterobilharzia americana
31773975 31773975 PRJNA1068830_P_NODE_24997_length_467_cov_2.162437_g24295_i0 PRJNA1068830 24997 467 2.162437 10.09858079 Schistocephalus solidus 70667 Platyhelminthes Platyhelminthes 153 2.5499999999999994e-42   NR VDL97057.1 70667 g24295 i0 46.5 2.01713062098501 157 82 99.6 1 466 2 181 337 VDL97057.1 unnamed protein product [Schistocephalus solidus] diamond 942 153 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Schistocephalus Schistocephalus solidus
32090494 32090494 PRJNA1068830_P_NODE_85678_length_244_cov_0.912281_g84975_i0 PRJNA1068830 85678 244 0.912281 2.22596564 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 63.9 1.29e-9   NR VZI19819.1 99802 g84975 i0 40.3 1.73360655737705 72 42 88.5 1 220 5 461 531 VZI19819.1 unnamed protein product [Spirometra erinaceieuropaei] diamond 423 63.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
32871557 32871557 PRJNA1068830_P_NODE_36400_length_372_cov_1.200669_g35697_i0 PRJNA1068830 36400 372 1.200669 4.46648868 Metazoa 33208 Platyhelminthes Platyhelminthes 97.1 8.31e-22   NR TNN12665.1 6182 g35697 i0 44.2 3.57258064516129 104 58 83.9 0 314 3 69 172 TNN12665.1 thiamine pyrophosphokinase 1 [Schistosoma japonicum] diamond 1329 97.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;