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contig_metadata

17 rows where bioproject = "PRJNA1068830", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 17 ✖

tax_clade 1

  • Sar · 17 ✖

bioproject 1

  • PRJNA1068830 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1458416 1458416 PRJNA1068830_P_NODE_83882_length_245_cov_0.906977_g83179_i0 PRJNA1068830 83882 245 0.906977 2.22209365 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 141 4.59e-29   NTclustered gi|695403226|ref|XM_009524933.1| 67593 g83179 i0 81.657 6.29795918367347 169 31 69 0 77 245 40 208 Phytophthora sojae hypothetical protein mRNA blastn 1543 141 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
10386168 10386168 PRJNA1068830_P_NODE_47889_length_317_cov_1.692623_g47186_i0 PRJNA1068830 47889 317 1.692623 5.36561491 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 183 1.01e-41   NTclustered gi|695370545|ref|XM_009516042.1| 67593 g47186 i0 79.211 80.1892744479495 279 46 86 12 11 283 73 345 Phytophthora sojae hypothetical protein mRNA blastn 25420 183 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
10387014 10387014 PRJNA1068830_P_NODE_81429_length_247_cov_0.896552_g80726_i0 PRJNA1068830 81429 247 0.896552 2.21448344 Phytophthora sp. XX-2020b 2817068 SAR_Eukaryotes SAR_Eukaryotes 274 4.38e-69   NTclustered gi|2205873338|gb|MW822323.1| 2817068 g80726 i0 86.64 95.5182186234818 247 33 100 0 1 247 740 986 Phytophthora sp. XX-2020b isolate 1BLX102 heat shock protein 90 (HSP90) gene, partial cds blastn 23593 274 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sp. XX-2020b
12936722 12936722 PRJNA1068830_P_NODE_49751_length_311_cov_0.983193_g49048_i0 PRJNA1068830 49751 311 0.983193 3.05773023 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 162 1.05e-46   NR DAZ92773.1 4803 g49048 i0 78.4 6.91639871382637 102 22 98.4 0 309 4 28 129 DAZ92773.1 TPA: hypothetical protein N0F65_008155 [Lagenidium giganteum] diamond 2151 163 0.993865030674847 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
16316835 16316835 PRJNA1068830_P_NODE_81273_length_247_cov_0.896552_g80570_i0 PRJNA1068830 81273 247 0.896552 2.21448344 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 124 4.66e-24   NTclustered gi|2795049776|ref|XM_067938656.1| 4785 g80570 i0 89 25.6882591093117 100 11 40 0 148 247 1980 1881 Phytophthora cinnamomi polyadenylate-binding protein 1-B (IUM83_13951), partial mRNA blastn 6345 124 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
19307843 19307843 PRJNA1068830_P_NODE_19836_length_537_cov_1.219828_g19137_i0 PRJNA1068830 19836 537 1.219828 6.55047636 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 198 3.509999999999999e-55   NR DAZ94473.1 4803 g19137 i0 57.3 2.6927374301676 164 68 91.1 2 41 529 43 205 DAZ94473.1 TPA: hypothetical protein N0F65_003509, partial [Lagenidium giganteum] diamond 1446 198 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
21859775 21859775 PRJNA1068830_P_NODE_51418_length_305_cov_1.344828_g50715_i0 PRJNA1068830 51418 305 1.344828 4.1017254 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 159 4.16e-48   NR TYZ60753.1 1485010 g50715 i0 76.2 8.94098360655738 101 24 99.3 0 304 2 22 122 TYZ60753.1 hypothetical protein PybrP1_007794 [[Pythium] brassicae (nom. inval.)] diamond 2727 159 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
23134893 23134893 PRJNA1068830_P_NODE_34259_length_385_cov_3.208333_g33556_i0 PRJNA1068830 34259 385 3.208333 12.35208205 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 309 1.97e-79   NTclustered gi|301103609|ref|XM_002900845.1| 403677 g33556 i0 83.041 74.774025974026 342 56 89 2 45 385 76 416 Phytophthora infestans T30-4 ADP-ribosylation factor family (PITG_12288), mRNA blastn 28788 309 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
27943427 27943427 PRJNA1068830_P_NODE_69045_length_259_cov_5.043011_g68342_i0 PRJNA1068830 69045 259 5.043011 13.06139849 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 55.5 6.1e-8   NR XP_067751054.1 164328 g68342 i0 65 1.38996138996139 40 13 46.3 1 257 138 13 51 XP_067751054.1 Ribonuclease H [Phytophthora ramorum] diamond 360 55.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
28353748 28353748 PRJNA1068830_P_NODE_79346_length_248_cov_0.891429_g78643_i0 PRJNA1068830 79346 248 0.891429 2.21074392 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 62.8 3.27e-9   NR OQR92960.1 74557 g78643 i0 74.4 3.7741935483871 39 10 47.2 0 130 246 9 47 OQR92960.1 hypothetical protein THRCLA_08577 [Thraustotheca clavata] diamond 936 62.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
30501242 30501242 PRJNA1068830_P_NODE_33513_length_391_cov_0.981132_g32810_i0 PRJNA1068830 33513 391 0.981132 3.83622612 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 95.5 6.24e-20   NR CCI40734.1 65357 g32810 i0 38.2 3 131 78 98.2 2 389 6 240 370 CCI40734.1 unnamed protein product [Albugo candida] diamond 1173 95.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
30920607 30920607 PRJNA1068830_P_NODE_64414_length_270_cov_1.822335_g63711_i0 PRJNA1068830 64414 270 1.822335 4.9203045 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 105 3.29e-24   NR OQS05744.1 74557 g63711 i0 56.3 0.966666666666667 87 37 95.6 1 5 262 980 1066 OQS05744.1 hypothetical protein THRCLA_02157 [Thraustotheca clavata] diamond 261 105 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
31236293 31236293 PRJNA1068830_P_NODE_81495_length_247_cov_0.896552_g80792_i0 PRJNA1068830 81495 247 0.896552 2.21448344 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 90.1 2.07e-19   NR CCI47870.1 65357 g80792 i0 58.4 9.44939271255061 77 32 93.5 0 236 6 45 121 CCI47870.1 unnamed protein product [Albugo candida] diamond 2334 90.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
31489690 31489690 PRJNA1068830_P_NODE_80016_length_248_cov_0.891429_g79313_i0 PRJNA1068830 80016 248 0.891429 2.21074392 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 55.5 1.14e-6   NR KAF0692056.1 120398 g79313 i0 41.8 0.955645161290323 79 42 91.9 3 236 9 134 211 KAF0692056.1 hypothetical protein As57867_016743 [Aphanomyces stellatus] diamond 237 55.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
32050396 32050396 PRJNA1068830_P_NODE_86418_length_243_cov_1.376471_g85715_i0 PRJNA1068830 86418 243 1.376471 3.34482453 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 61.6 8.31e-9   NR CCI47428.1 65357 g85715 i0 44.7 4.61728395061728 76 41 92.6 1 237 13 404 479 CCI47428.1 unnamed protein product [Albugo candida] diamond 1122 62 0.993548387096774 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
32240493 32240493 PRJNA1068830_P_NODE_81818_length_246_cov_1.768786_g81115_i0 PRJNA1068830 81818 246 1.768786 4.35121356 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 99 1.57e-22   NR CCI48837.1 65357 g81115 i0 73.7 1.40243902439024 57 15 69.5 0 1 171 277 333 CCI48837.1 unnamed protein product [Albugo candida] diamond 345 99 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
32249027 32249027 PRJNA1068830_P_NODE_67038_length_264_cov_1.633508_g66335_i0 PRJNA1068830 67038 264 1.633508 4.31246112 Salisapilia tartarea 983661 SAR_Eukaryotes SAR_Eukaryotes 130 8.57e-36   NR AYW51761.1 983661 g66335 i0 67.1 2.90909090909091 82 26 93.2 1 248 3 44 124 AYW51761.1 sphingolipid delta(4)-desaturase DES1-like protein, partial [Salisapilia tartarea] diamond 768 130 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Salisapiliaceae Salisapilia Salisapilia tartarea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;