RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1068830", tax_clade = "Sar" and tax_phylum = "Endomyxa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1068830 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14211069 14211069 PRJNA1068830_P_NODE_26372_length_451_cov_3.142857_g25669_i0 PRJNA1068830 26372 451 3.142857 14.17428507 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 228 7.68e-67   NR CEO98907.1 37360 g25669 i0 70 150.086474501109 140 42 93.1 0 420 1 444 583 CEO98907.1 hypothetical protein PBRA_007021 [Plasmodiophora brassicae] diamond 67689 230 0.991304347826087 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31172842 31172842 PRJNA1068830_P_NODE_73635_length_252_cov_1.307263_g72932_i0 PRJNA1068830 73635 252 1.307263 3.29430276 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 75.9 1.9e-14   NR CEO94682.1 37360 g72932 i0 43.8 0.952380952380952 80 39 88.1 1 2 223 16 95 CEO94682.1 hypothetical protein PBRA_000467 [Plasmodiophora brassicae] diamond 240 75.9 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31639014 31639014 PRJNA1068830_P_NODE_70536_length_256_cov_1.704918_g69833_i0 PRJNA1068830 70536 256 1.704918 4.36459008 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 89.7 4.84e-20   NR CEP03653.1 37360 g69833 i0 59.4 4.9453125 69 28 80.9 0 207 1 7 75 CEP03653.1 hypothetical protein PBRA_003260 [Plasmodiophora brassicae] diamond 1266 90.1 0.995560488346282 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;