RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1068830", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1068830 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27794031 27794031 PRJNA1068830_P_NODE_84084_length_245_cov_0.906977_g83381_i0 PRJNA1068830 84084 245 0.906977 2.22209365 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 133 1.41e-35   NR MDD5421816.1 2035772 g83381 i0 77.8 1.9469387755102 81 18 99.2 0 2 244 211 291 MDD5421816.1 DegT/DnrJ/EryC1/StrS family aminotransferase [Candidatus Omnitrophota bacterium] diamond 477 133 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32153812 32153812 PRJNA1068830_P_NODE_72498_length_253_cov_0.866667_g71795_i0 PRJNA1068830 72498 253 0.866667 2.19266751 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 141 5.679999999999999e-37   NR MBL8014117.1 2035772 g71795 i0 81.7 1.94466403162055 82 15 97.2 0 3 248 341 422 MBL8014117.1 ATP-dependent DNA helicase RecG [Candidatus Omnitrophota bacterium] diamond 492 141 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;