RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1068830", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA1068830 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27446815 27446815 PRJNA1068830_P_NODE_83383_length_245_cov_1.360465_g82680_i0 PRJNA1068830 83383 245 1.360465 3.33313925 Nitrospinota bacterium 2026769 Bacteria Bacteria 57 1.63e-8   NR MBF0170803.1 2026769 g82680 i0 73 0.906122448979592 37 10 45.3 0 2 112 45 81 MBF0170803.1 hypothetical protein [Nitrospinota bacterium] diamond 222 57 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
32027224 32027224 PRJNA1068830_P_NODE_45798_length_325_cov_2.464286_g45095_i0 PRJNA1068830 45798 325 2.464286 8.0089295 Nitrospinota bacterium 2026769 Bacteria Bacteria 61.6 2e-8   NR MDH4185212.1 2026769 g45095 i0 31.7 0.96 104 66 91.4 2 298 2 129 232 MDH4185212.1 J domain-containing protein [Nitrospinota bacterium] diamond 312 61.6 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;