RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1068830", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1068830 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27035733 27035733 PRJNA1068830_P_NODE_8342_length_883_cov_2.201235_g7745_i0 PRJNA1068830 8342 883 2.201235 19.43690505 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 43.9 0.0481   NR MCK7518050.1 2049428 g7745 i0 36.1 0.244620611551529 72 42 24.1 2 245 457 8 76 MCK7518050.1 hypothetical protein [Ignavibacteriales bacterium] diamond 216 43.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
27667746 27667746 PRJNA1068830_P_NODE_88024_length_242_cov_1.165680_g87321_i0 PRJNA1068830 88024 242 1.16568 2.8209456 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 78.2 1.22e-14   NR MDP3831013.1 2651163 g87321 i0 50 2.85123966942149 80 40 99.2 0 2 241 637 716 MDP3831013.1 phage tail tape measure protein [Ignavibacteriaceae bacterium] diamond 690 78.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;