RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1068830", tax_clade = "FCB group" and tax_phylum = "Candidatus Zixiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Zixiibacteriota · 1 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 1 ✖

bioproject 1

  • PRJNA1068830 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28678099 28678099 PRJNA1068830_P_NODE_81607_length_247_cov_0.890805_g80904_i0 PRJNA1068830 81607 247 0.890805 2.20028835 candidate division Zixibacteria bacterium CG_4_9_14_3_um_filter_46_8 1975520 Bacteria Bacteria 153 1.44e-45   NR PJA26327.1 1975520 g80904 i0 92.7 1.9919028340081 82 6 99.6 0 247 2 25 106 PJA26327.1 MAG: hypothetical protein CO189_11400 [candidate division Zixibacteria bacterium CG_4_9_14_3_um_filter_46_8] diamond 492 153 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         candidate division Zixibacteria bacterium CG_4_9_14_3_um_filter_46_8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;