contig_metadata
10 rows where bioproject = "PRJNA1068830" and tax_clade = "Bacteria candidate phyla"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29183298 | 29183298 | PRJNA1068830_P_NODE_23169_length_489_cov_1.963942_g22468_i0 | PRJNA1068830 | 23169 | 489 | 1.963942 | 9.60367638 | Candidatus Roizmanbacteria bacterium CG_4_1 | 2282149 | Bacteria | Bacteria | 46.6 | 0.0176 | NR | PIY71633.1 | 1974826 | g22468 | i0 | 29.6 | 0.932515337423313 | 152 | 92 | 88.3 | 7 | 462 | 31 | 69 | 213 | PIY71633.1 MAG: IMP dehydrogenase [Candidatus Roizmanbacteria bacterium CG_4_10_14_0_8_um_filter_33_9] | diamond | 456 | 46.6 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Roizmaniibacteriota | Candidatus Roizmanbacteria bacterium CG_4_10_14_0_8_um_filter_33_9 | ||||||
| 29341091 | 29341091 | PRJNA1068830_P_NODE_31069_length_408_cov_3.641791_g30366_i0 | PRJNA1068830 | 31069 | 408 | 3.641791 | 14.85850728 | Candidatus Doudnabacteria bacterium | 2052150 | Bacteria | Bacteria | 52.4 | 1.94e-5 | NR | MFA4880568.1 | 2052150 | g30366 | i0 | 37.8 | 1.33088235294118 | 90 | 47 | 64 | 4 | 147 | 407 | 3 | 86 | MFA4880568.1 dUTP diphosphatase [Candidatus Doudnabacteria bacterium] | diamond | 543 | 52.4 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Doudnaibacteriota | Candidatus Doudnabacteria bacterium | ||||||
| 29341093 | 29341093 | PRJNA1068830_P_NODE_45189_length_328_cov_1.482353_g44486_i0 | PRJNA1068830 | 45189 | 328 | 1.482353 | 4.86211784 | Candidatus Parcubacteria bacterium | 2762014 | Bacteria | Bacteria | 195 | 2.2000000000000008e-59 | NR | RMD61734.1 | 2762014 | g44486 | i0 | 88.9 | 0.98780487804878 | 108 | 12 | 98.8 | 0 | 326 | 3 | 119 | 226 | RMD61734.1 MAG: N4-gp56 family major capsid protein [Candidatus Parcubacteria bacterium] | diamond | 324 | 195 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Candidatus Parcubacteria bacterium | ||||||
| 29751197 | 29751197 | PRJNA1068830_P_NODE_39851_length_353_cov_0.828571_g39148_i0 | PRJNA1068830 | 39851 | 353 | 0.828571 | 2.92485563 | Candidatus Woesebacteria bacterium | 2026804 | Bacteria | Bacteria | 187 | 1.0799999999999998e-56 | NR | MDO8340819.1 | 2026804 | g39148 | i0 | 80.4 | 0.909348441926346 | 107 | 21 | 90.9 | 0 | 351 | 31 | 186 | 292 | MDO8340819.1 AAA family ATPase [Candidatus Woesebacteria bacterium] | diamond | 321 | 187 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Woeseibacteriota | Candidatus Woesebacteria bacterium | ||||||
| 29909510 | 29909510 | PRJNA1068830_P_NODE_31171_length_408_cov_1.325373_g30468_i0 | PRJNA1068830 | 31171 | 408 | 1.325373 | 5.40752184 | Minisyncoccota bacterium | 2053589 | Bacteria | Bacteria | 55.1 | 1.18e-5 | NR | HVX90321.1 | 2053589 | g30468 | i0 | 32.5 | 0.838235294117647 | 114 | 65 | 82.4 | 5 | 386 | 51 | 332 | 435 | HVX90321.1 carbohydrate-binding protein [Candidatus Paceibacterota bacterium] | diamond | 342 | 55.1 | 1 | Bacteria | Bacteria candidate phyla | Minisyncoccota | Minisyncoccota bacterium | ||||||
| 30730792 | 30730792 | PRJNA1068830_P_NODE_24554_length_473_cov_1.120000_g23853_i0 | PRJNA1068830 | 24554 | 473 | 1.12 | 5.2976 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 173 | 3.71e-51 | NR | MBX6334425.1 | 2026720 | g23853 | i0 | 67.5 | 0.799154334038055 | 126 | 40 | 79.9 | 1 | 378 | 1 | 6 | 130 | MBX6334425.1 DUF2815 domain-containing protein [Candidatus Saccharibacteria bacterium] | diamond | 378 | 173 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 30857159 | 30857159 | PRJNA1068830_P_NODE_24394_length_474_cov_2.553616_g23693_i0 | PRJNA1068830 | 24394 | 474 | 2.553616 | 12.10413984 | Candidatus Dojkabacteria bacterium | 2099670 | Bacteria | Bacteria | 107 | 7.3e-26 | NR | MCK9416830.1 | 2099670 | g23693 | i0 | 47 | 0.740506329113924 | 117 | 57 | 72.8 | 2 | 464 | 120 | 61 | 174 | MCK9416830.1 hypothetical protein [Candidatus Dojkabacteria bacterium] | diamond | 351 | 107 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Dojkabacteria bacterium | |||||||
| 31268050 | 31268050 | PRJNA1068830_P_NODE_62975_length_274_cov_0.940299_g62272_i0 | PRJNA1068830 | 62975 | 274 | 0.940299 | 2.57641926 | Candidatus Parcubacteria bacterium | 2762014 | Bacteria | Bacteria | 145 | 2.39e-40 | NR | RMD61734.1 | 2762014 | g62272 | i0 | 81.9 | 0.908759124087591 | 83 | 15 | 90.9 | 0 | 249 | 1 | 1 | 83 | RMD61734.1 MAG: N4-gp56 family major capsid protein [Candidatus Parcubacteria bacterium] | diamond | 249 | 145 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Candidatus Parcubacteria bacterium | ||||||
| 31615962 | 31615962 | PRJNA1068830_P_NODE_88896_length_242_cov_0.923077_g88193_i0 | PRJNA1068830 | 88896 | 242 | 0.923077 | 2.23384634 | Candidatus Buchananbacteria bacterium | 2268182 | Bacteria | Bacteria | 46.2 | 0.00216 | NR | MBD3359655.1 | 2268182 | g88193 | i0 | 40 | 0.681818181818182 | 55 | 30 | 68.2 | 1 | 15 | 179 | 322 | 373 | MBD3359655.1 hypothetical protein [Candidatus Buchananbacteria bacterium] | diamond | 165 | 46.2 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Buchananiibacteriota | Candidatus Buchananbacteria bacterium | ||||||
| 32153794 | 32153794 | PRJNA1068830_P_NODE_24418_length_474_cov_1.980050_g23717_i0 | PRJNA1068830 | 24418 | 474 | 1.98005 | 9.385437 | Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_ | 2750075 | Bacteria | Bacteria | 45.4 | 0.0217 | NR | OGD92854.1 | 1797712 | g23717 | i0 | 30.8 | 0.677215189873418 | 107 | 66 | 63.9 | 4 | 25 | 327 | 70 | 174 | OGD92854.1 MAG: hypothetical protein A2697_05265 [Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_41_44] | diamond | 321 | 45.4 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Curtissiibacteriota | Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_41_44 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;