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contig_metadata

13 rows where bioproject = "PRJNA1068830" and tax_clade = "Amoebozoa"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 13 ✖

bioproject 1

  • PRJNA1068830 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7835269 7835269 PRJNA1068830_P_NODE_42107_length_342_cov_0.843866_g41404_i0 PRJNA1068830 42107 342 0.843866 2.88602172 Paramoeba perurans 437603 Discosea other_Eukaryota 449 9.8100000000000015e-122   NTclustered gi|156617355|gb|EU089662.1| 437603 g41404 i0 90.351 98.3099415204678 342 33 100 0 1 342 555 214 Neoparamoeba perurans actin mRNA, partial cds blastn 33622 449 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
18034643 18034643 PRJNA1068830_P_NODE_49575_length_311_cov_1.966387_g48872_i0 PRJNA1068830 49575 311 1.966387 6.11546357 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 239 2.08e-58   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g48872 i0 85.043 24.8842443729904 234 35 75 0 12 245 274 41 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 7739 239 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22691274 22691274 PRJNA1068830_P_NODE_83558_length_245_cov_0.906977_g82855_i0 PRJNA1068830 83558 245 0.906977 2.22209365 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 171 5.85e-38   NTclustered gi|470510585|ref|XM_004351497.1| 1257118 g82855 i0 79.518 91.5020408163265 249 43 100 8 1 245 831 587 Acanthamoeba castellanii str. Neff transport protein Sec61 alpha subunit, putative (ACA1_149400), partial mRNA blastn 22418 171 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26909194 26909194 PRJNA1068830_P_NODE_79602_length_248_cov_0.891429_g78899_i0 PRJNA1068830 79602 248 0.891429 2.21074392 Cavenderia fasciculata 261658 Evosea other_Eukaryota 95.9 1.27e-22   NR XP_004358614.1 261658 g78899 i0 87.3 1.99596774193548 55 7 66.5 0 167 3 16 70 XP_004358614.1 vacuolar ATPase proteolipid subunit [Cavenderia fasciculata] diamond 495 95.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28172683 28172683 PRJNA1068830_P_NODE_82106_length_246_cov_0.901734_g81403_i0 PRJNA1068830 82106 246 0.901734 2.21826564 Dictyostelium purpureum 5786 Evosea other_Eukaryota 80.1 2.65e-15   NR XP_003292221.1 5786 g81403 i0 58.5 0.792682926829268 65 27 79.3 0 6 200 606 670 XP_003292221.1 uncharacterized protein DICPUDRAFT_57799 [Dictyostelium purpureum] diamond 195 80.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28362113 28362113 PRJNA1068830_P_NODE_63486_length_272_cov_2.090452_g62783_i0 PRJNA1068830 63486 272 2.090452 5.68602944 Copromyxa protea 931554 Tubulinea other_Eukaryota 172 1.26e-49   NR BAN33737.1 931554 g62783 i0 88.9 0.992647058823529 90 10 99.3 0 2 271 363 452 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 270 172 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
28551829 28551829 PRJNA1068830_P_NODE_88107_length_242_cov_0.923077_g87404_i0 PRJNA1068830 88107 242 0.923077 2.23384634 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 72.4 1.29e-12   NR XP_004341397.1 1257118 g87404 i0 59.7 0.768595041322314 62 19 76.9 1 241 56 456 511 XP_004341397.1 premRNA processing factor 3 (PRP3) protein [Acanthamoeba castellanii str. Neff] diamond 186 72.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29593184 29593184 PRJNA1068830_P_NODE_24410_length_474_cov_2.084788_g23709_i0 PRJNA1068830 24410 474 2.084788 9.88189512 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 46.6 0.0175   NR XP_641817.1 352472 g23709 i0 25.6 1.28481012658228 125 89 77.2 2 51 416 1038 1161 XP_641817.1 hypothetical protein DDB_G0279365 [Dictyostelium discoideum AX4] diamond 609 46.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
30501248 30501248 PRJNA1068830_P_NODE_60793_length_279_cov_1.378641_g60090_i0 PRJNA1068830 60793 279 1.378641 3.84640839 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 87.8 7.13e-18   NR XP_020435829.1 670386 g60090 i0 49.5 1.98924731182796 95 36 98.9 4 4 279 206 291 XP_020435829.1 cysteine proteinase 1 [Heterostelium album PN500] diamond 555 87.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
30667626 30667626 PRJNA1068830_P_NODE_22553_length_497_cov_2.221698_g21852_i0 PRJNA1068830 22553 497 2.221698 11.04183906 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 71.2 5.31e-11   NR PRP85627.1 1890364 g21852 i0 36.9 0.670020120724346 111 38 67 1 354 22 71 149 PRP85627.1 hypothetical protein PROFUN_06416 [Planoprotostelium fungivorum] diamond 333 71.2 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31742331 31742331 PRJNA1068830_P_NODE_36977_length_368_cov_2.379661_g36274_i0 PRJNA1068830 36977 368 2.379661 8.75715248 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 132 1.3e-33   NR KAH3766637.1 1580589 g36274 i0 52.6 0.945652173913043 116 54 94.6 1 368 21 306 420 KAH3766637.1 acidstable alpha-amylase [Pelomyxa schiedti] diamond 348 132 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
32240491 32240491 PRJNA1068830_P_NODE_72538_length_253_cov_0.866667_g71835_i0 PRJNA1068830 72538 253 0.866667 2.19266751 root 1 Root_unresolved Root_unresolved 74.3 1.31e-14   NR XP_652635.1 294381 g71835 i0 42.9 4.13833992094862 70 40 83 0 216 7 1 70 XP_652635.1 thioredoxin, putative [Entamoeba histolytica HM-1:IMSS] diamond 1047 74.3 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
32690874 32690874 PRJNA1068830_P_NODE_61620_length_277_cov_1.308824_g60917_i0 PRJNA1068830 61620 277 1.308824 3.62544248 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 43.1 0.0384   NR XP_012748989.1 1410327 g60917 i0 34.8 0.498194945848375 46 30 49.8 0 32 169 262 307 XP_012748989.1 hypothetical protein SAMD00019534_112060, partial [Acytostelium subglobosum LB1] diamond 138 43.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;