RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where bioproject = "PRJNA1068513" and tax_phylum = "Peploviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 15 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1068513 · 15 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1013633 1013633 PRJNA1068513_S_NODE_3961_length_449_cov_3.784574_g3916_i0 PRJNA1068513 3961 449 3.784574 16.99273726 root 1 Root_unresolved Root_unresolved 84.2 1.54e-11   NTclustered gi|1953437643|gb|MT157331.1| 47929 g3916 i0 94.545 14.5991091314031 55 1 12 2 1 54 162942 162889 Macacine betaherpesvirus 3 strain UCD59, complete genome blastn 6555 84.2 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus macacinebeta3
6559714 6559714 PRJNA1068513_S_NODE_11646_length_258_cov_1.345946_g11600_i0 PRJNA1068513 11646 258 1.345946 3.47254068 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 62.1 3.9e-5   NTclustered gi|2609791689|gb|OR652421.1| 10376 g11600 i0 95 0.418604651162791 40 1 15 1 5 43 12987 13026 Human gammaherpesvirus 4 strain 720, partial genome blastn 108 62.1 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
9941751 9941751 PRJNA1068513_S_NODE_10088_length_281_cov_2.221154_g10042_i0 PRJNA1068513 10088 281 2.221154 6.24144274 Viruses 10239 Viruses Viruses 60.2 1.55e-4   NTclustered gi|2609791689|gb|OR652421.1| 10376 g10042 i0 97.222 12.9537366548043 36 0 12 1 247 281 13030 12995 Human gammaherpesvirus 4 strain 720, partial genome blastn 3640 60.2 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
10385121 10385121 PRJNA1068513_S_NODE_1649_length_600_cov_40.618596_g1608_i0 PRJNA1068513 1649 600 40.618596 243.711576 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 60.2 3.55e-4   NTclustered gi|2609791700|gb|OR652422.1| 10376 g1608 i0 97.222 0.06 36 0 6 1 562 597 9245 9279 Human gammaherpesvirus 4 strain 725, partial genome blastn 36 60.2 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
11217011 11217011 PRJNA1068513_S_NODE_1229_length_652_cov_38.683938_g1189_i0 PRJNA1068513 1229 652 38.683938 252.21927576 root 1 Root_unresolved Root_unresolved 87.9 1.78e-12   NTclustered gi|1953437643|gb|MT157331.1| 47929 g1189 i0 94.737 10.5030674846626 57 1 9 2 597 652 162889 162944 Macacine betaherpesvirus 3 strain UCD59, complete genome blastn 6848 87.9 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus macacinebeta3
15041301 15041301 PRJNA1068513_S_NODE_2052_length_564_cov_3.040733_g2010_i0 PRJNA1068513 2052 564 3.040733 17.14973412 Viruses 10239 Viruses Viruses 69.4 5.52e-7   NTclustered gi|1465382783|emb|LS992247.1| 10376 g2010 i0 100 7.43262411347518 37 0 7 0 2 38 58020 58056 Human gammaherpesvirus 4 isolate Human herpesvirus 4 genome assembly, chromosome: I blastn 4192 69.4 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
16316077 16316077 PRJNA1068513_S_NODE_9393_length_294_cov_0.859729_g9347_i0 PRJNA1068513 9393 294 0.859729 2.52760326 Viruses 10239 Viruses Viruses 71.3 7.53e-8   NTclustered gi|1465382783|emb|LS992247.1| 10376 g9347 i0 93.75 15.1326530612245 48 1 16 2 2 49 58011 58056 Human gammaherpesvirus 4 isolate Human herpesvirus 4 genome assembly, chromosome: I blastn 4449 71.3 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
17591415 17591415 PRJNA1068513_S_NODE_4974_length_406_cov_5.729730_g4929_i0 PRJNA1068513 4974 406 5.72973 23.2627038 Viruses 10239 Viruses Viruses 65.8 5e-6   NTclustered gi|1465382783|emb|LS992247.1| 10376 g4929 i0 100 9.66502463054187 35 0 9 0 1 35 58022 58056 Human gammaherpesvirus 4 isolate Human herpesvirus 4 genome assembly, chromosome: I blastn 3924 65.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
17591425 17591425 PRJNA1068513_S_NODE_9494_length_292_cov_1.091324_g9448_i0 PRJNA1068513 9494 292 1.091324 3.18666608 Viruses 10239 Viruses Viruses 52.8 0.027   NTclustered gi|2609791689|gb|OR652421.1| 10376 g9448 i0 100 0.191780821917808 28 0 10 0 1 28 12999 13026 Human gammaherpesvirus 4 strain 720, partial genome blastn 56 52.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
18033649 18033649 PRJNA1068513_S_NODE_7975_length_321_cov_2.322581_g7929_i0 PRJNA1068513 7975 321 2.322581 7.45548501 Cytomegalovirus macacinebeta3 3050308 Viruses Viruses 128 4.86e-25   NTclustered gi|1953437643|gb|MT157331.1| 47929 g7929 i0 97.333 25.6635514018692 75 2 23 0 1 75 162961 162887 Macacine betaherpesvirus 3 strain UCD59, complete genome blastn 8238 128 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus macacinebeta3
20140050 20140050 PRJNA1068513_S_NODE_2496_length_530_cov_4.334792_g2453_i0 PRJNA1068513 2496 530 4.334792 22.9743976 root 1 Root_unresolved Root_unresolved 60.2 3.11e-4   NTclustered gi|1465382783|emb|LS992247.1| 10376 g2453 i0 97.222 6.74528301886792 36 0 7 1 494 529 88235 88201 Human gammaherpesvirus 4 isolate Human herpesvirus 4 genome assembly, chromosome: I blastn 3575 60.2 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
21415609 21415609 PRJNA1068513_S_NODE_8817_length_304_cov_18.467532_g8771_i0 PRJNA1068513 8817 304 18.467532 56.14129728 root 1 Root_unresolved Root_unresolved 63.9 1.31e-5   NTclustered gi|1953437643|gb|MT157331.1| 47929 g8771 i0 91.489 14.5953947368421 47 2 15 2 1 46 162934 162889 Macacine betaherpesvirus 3 strain UCD59, complete genome blastn 4437 63.9 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus macacinebeta3
22690429 22690429 PRJNA1068513_S_NODE_1478_length_620_cov_1.610603_g1437_i0 PRJNA1068513 1478 620 1.610603 9.9857386 root 1 Root_unresolved Root_unresolved 89.8 4.69e-13   NTclustered gi|1953437643|gb|MT157331.1| 47929 g1437 i0 94.828 11.1 58 1 9 2 1 57 162945 162889 Macacine betaherpesvirus 3 strain UCD59, complete genome blastn 6882 89.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus macacinebeta3
23134141 23134141 PRJNA1068513_S_NODE_1239_length_651_cov_3.482699_g1199_i0 PRJNA1068513 1239 651 3.482699 22.67237049 Cytomegalovirus macacinebeta3 3050308 Viruses Viruses 117 2.26e-21   NTclustered gi|1953437643|gb|MT157331.1| 47929 g1199 i0 95.89 12.3010752688172 73 1 11 2 32 103 162960 162889 Macacine betaherpesvirus 3 strain UCD59, complete genome blastn 8008 117 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus macacinebeta3
23966011 23966011 PRJNA1068513_S_NODE_9679_length_289_cov_1.004630_g9633_i0 PRJNA1068513 9679 289 1.00463 2.9033807 Viruses 10239 Viruses Viruses 54.7 0.007   NTclustered gi|2609791689|gb|OR652421.1| 10376 g9633 i0 100 0.200692041522491 29 0 10 0 250 278 13026 12998 Human gammaherpesvirus 4 strain 720, partial genome blastn 58 54.7 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;