RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1068513" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1068513 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27730997 27730997 PRJNA1068513_S_NODE_9404_length_293_cov_2.563636_g9358_i0 PRJNA1068513 9404 293 2.563636 7.51145348 Tubulinosema ratisbonensis 291195 Fungi Fungi 58.2 2.51e-7   NR RVD91707.1 291195 g9358 i0 36.3 0.931740614334471 91 50 86 2 292 41 206 295 RVD91707.1 serine threonine kinase [Tubulinosema ratisbonensis] diamond 273 58.2 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis
29521952 29521952 PRJNA1068513_S_NODE_11650_length_258_cov_1.297297_g11604_i0 PRJNA1068513 11650 258 1.297297 3.34702626 Eukaryota 2759 Fungi Fungi 53.1 1.29e-6   NR KAF7699600.1 658444 g11604 i0 47.3 1.25581395348837 55 29 64 0 82 246 4 58 KAF7699600.1 hypothetical protein CDIK_1140, partial [Cucumispora dikerogammari] diamond 324 53.1 1 Eukaryota Opisthokonta Fungi Microsporidia       Cucumispora Cucumispora dikerogammari
30595846 30595846 PRJNA1068513_S_NODE_13133_length_244_cov_0.912281_g13087_i0 PRJNA1068513 13133 244 0.912281 2.22596564 Opisthokonta 33154 Fungi Fungi 42.7 0.0376   NR KAK6089979.1 40135 g13087 i0 56.7 1.22950819672131 30 13 36.9 0 91 2 466 495 KAK6089979.1 hypothetical protein P3W45_001025 [Vairimorpha bombi] diamond 300 43.1 0.990719257540603 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha bombi
31015156 31015156 PRJNA1068513_S_NODE_595_length_786_cov_16.800842_g566_i0 PRJNA1068513 595 786 16.800842 132.05461812 Mitosporidium daphniae 1485682 Fungi Fungi 280 7.2299999999999996e-90   NR XP_013239321.1 1485682 g566 i0 66.3 0.759541984732824 199 66 75.6 1 85 678 169 367 XP_013239321.1 uncharacterized protein DI09_129p80, partial [Mitosporidium daphniae] diamond 597 280 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;