RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1068513" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1068513 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30415210 30415210 PRJNA1068513_S_NODE_9433_length_293_cov_0.990909_g9387_i0 PRJNA1068513 9433 293 0.990909 2.90336337 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 170 3.76e-50   NR ETO17605.1 46433 g9387 i0 93.8 0.993174061433447 97 6 99.3 0 293 3 2 98 ETO17605.1 Flagellar capping protein, partial [Reticulomyxa filosa] diamond 291 170 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30604343 30604343 PRJNA1068513_S_NODE_5653_length_382_cov_2.815534_g5607_i0 PRJNA1068513 5653 382 2.815534 10.75533988 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 70.1 4.39e-11   NR ETO04741.1 46433 g5607 i0 37.9 0.746073298429319 95 52 69.1 1 327 64 350 444 ETO04741.1 hypothetical protein RFI_32655, partial [Reticulomyxa filosa] diamond 285 70.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;