RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1068513", tax_kingdom = "Pseudomonadati" and tax_phylum = "Aquificota"

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tax_superkingdom 1

tax_phylum 1

  • Aquificota · 2 ✖

tax_kingdom 1

  • Pseudomonadati · 2 ✖

bioproject 1

  • PRJNA1068513 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29584832 29584832 PRJNA1068513_S_NODE_12710_length_247_cov_1.775862_g12664_i0 PRJNA1068513 12710 247 1.775862 4.38637914 root 1 Root_unresolved Root_unresolved 51.6 2.75e-5   NR MCS7285004.1 940 g12664 i0 44.1 3.18218623481781 68 26 68 2 202 35 228 295 MCS7285004.1 amidophosphoribosyltransferase [Hydrogenobacter thermophilus] diamond 786 52 0.992307692307692 Bacteria   Pseudomonadati Aquificota Aquificia Aquificales Aquificaceae Hydrogenobacter Hydrogenobacter thermophilus
30983735 30983735 PRJNA1068513_S_NODE_11334_length_262_cov_2.873016_g11288_i0 PRJNA1068513 11334 262 2.873016 7.52730192 Thermocrinis minervae 381751 Bacteria Bacteria 83.2 2.57e-16   NR WP_079654258.1 381751 g11288 i0 63.8 4.64885496183206 58 21 66.4 0 259 86 419 476 WP_079654258.1 leucyl aminopeptidase [Thermocrinis minervae] diamond 1218 83.2 1 Bacteria   Pseudomonadati Aquificota Aquificia Aquificales Aquificaceae Thermocrinis Thermocrinis minervae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;