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contig_metadata

23 rows where bioproject = "PRJNA1068513", tax_kingdom = "Bacillati" and tax_phylum = "Bacillota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillota · 23 ✖

tax_kingdom 1

  • Bacillati · 23 ✖

bioproject 1

  • PRJNA1068513 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1013639 1013639 PRJNA1068513_S_NODE_6801_length_350_cov_1.783394_g6755_i0 PRJNA1068513 6801 350 1.783394 6.241879 Clostridium 1485 Bacteria Bacteria 52.8 0.033   NTclustered gi|2385532608|gb|CP086246.1| 2843318 g6755 i0 100 0.24 28 0 8 0 173 200 2436613 2436640 Clostridium sp. CF011 chromosome, complete genome blastn 84 52.8 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium sp. CF011
2288886 2288886 PRJNA1068513_S_NODE_6602_length_355_cov_8.248227_g6556_i0 PRJNA1068513 6602 355 8.248227 29.28120585 Blautia 572511 Bacteria Bacteria 52.8 0.034   NTclustered gi|2884834701|gb|CP176621.1| 1532 g6556 i0 100 0.552112676056338 28 0 8 0 100 127 1870490 1870463 Blautia coccoides strain RS-04 chromosome, complete genome blastn 196 52.8 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia coccoides
6116803 6116803 PRJNA1068513_S_NODE_7145_length_341_cov_2.764925_g7099_i0 PRJNA1068513 7145 341 2.764925 9.42839425 root 1 Root_unresolved Root_unresolved 54.7 0.009   NTclustered gi|2702638792|gb|CP148048.1| 33033 g7099 i0 100 0.859237536656892 29 0 9 0 152 180 1540077 1540105 Parvimonas micra strain JM503A chromosome, complete genome blastn 293 54.7 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Parvimonas Parvimonas micra
9941752 9941752 PRJNA1068513_S_NODE_11328_length_262_cov_4.571429_g11282_i0 PRJNA1068513 11328 262 4.571429 11.97714398 root 1 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|1878067685|dbj|LC566215.1| 1352 g11282 i0 96.97 12.0572519083969 33 1 13 0 13 45 98 130 Enterococcus faecium EV0426-12 plasmid pIHVA-EV0426-12 DNA, complete sequence blastn 3159 56.5 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus faecium
11660555 11660555 PRJNA1068513_S_NODE_8370_length_313_cov_2.008333_g8324_i0 PRJNA1068513 8370 313 2.008333 6.28608229 Clostridium beijerinckii 1520 Bacteria Bacteria 52.8 0.029   NTclustered gi|2324517193|gb|CP107022.1| 1520 g8324 i0 94.286 0.335463258785943 35 1 11 1 197 230 3529705 3529739 Clostridium beijerinckii strain CloBei18h chromosome, complete genome blastn 105 52.8 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium beijerinckii
12935610 12935610 PRJNA1068513_S_NODE_3071_length_494_cov_4.187648_g3026_i0 PRJNA1068513 3071 494 4.187648 20.68698112 Bacteria 2 Bacteria Bacteria 64.7 1.03e-8   NR WP_005489056.1 43595 g3026 i0 30.2 2.73886639676113 116 78 69.2 3 454 113 352 466 WP_005489056.1 PLP-dependent aminotransferase family protein [Halanaerobium saccharolyticum] diamond 1353 65.1 0.993855606758833 Bacteria   Bacillati Bacillota Clostridia Halanaerobiales Halanaerobiaceae Halanaerobium Halanaerobium saccharolyticum
14210540 14210540 PRJNA1068513_S_NODE_2512_length_529_cov_5.885965_g2469_i0 PRJNA1068513 2512 529 5.885965 31.13675485 Bacillus sp. Y1 352858 Bacteria Bacteria 54.7 0.014   NTclustered gi|1480120062|gb|CP030028.1| 352858 g2469 i0 100 0.054820415879017 29 0 5 0 352 380 3456154 3456126 Bacillus sp. Y1 chromosome, complete genome blastn 29 54.7 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus sp. Y1
14210577 14210577 PRJNA1068513_S_NODE_5552_length_386_cov_1.923323_g5506_i0 PRJNA1068513 5552 386 1.923323 7.42402678 Clostridium intestinale 36845 Bacteria Bacteria 52.8 0.037   NTclustered gi|2651387689|gb|CP121166.1| 36845 g5506 i0 100 0.0725388601036269 28 0 7 0 30 57 1563141 1563114 Clostridium intestinale strain PC17 chromosome, complete genome blastn 28 52.8 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium intestinale
15041312 15041312 PRJNA1068513_S_NODE_5592_length_384_cov_3.758842_g5546_i0 PRJNA1068513 5592 384 3.758842 14.43395328 Agathobacter 1766253 Bacteria Bacteria 54.7 0.01   NTclustered gi|2202783703|gb|CP092643.1| 39491 g5546 i0 100 0.309895833333333 29 0 8 0 7 35 552712 552740 Agathobacter rectalis strain VPI 0990 chromosome, complete genome blastn 119 54.7 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Agathobacter Agathobacter rectalis
17591402 17591402 PRJNA1068513_S_NODE_12894_length_246_cov_1.092486_g12848_i0 PRJNA1068513 12894 246 1.092486 2.68751556 Clostridium 1485 Bacteria Bacteria 54.7 0.006   NTclustered gi|2031304926|gb|CP073653.1| 1520 g12848 i0 100 1.0609756097561 29 0 12 0 211 239 5633305 5633277 Clostridium beijerinckii strain DSM 791 chromosome, complete genome blastn 261 54.7 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium beijerinckii
23134188 23134188 PRJNA1068513_S_NODE_3239_length_485_cov_6.266990_g3194_i0 PRJNA1068513 3239 485 6.26699 30.3949015 root 1 Root_unresolved Root_unresolved 157 3.72e-46   NR MFG1554821.1 1280 g3194 i0 67.9 2.77113402061856 112 35 68.7 1 484 152 16 127 MFG1554821.1 ferritin [Staphylococcus aureus] diamond 1344 158 0.993670886075949 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus
28069587 28069587 PRJNA1068513_S_NODE_10665_length_273_cov_1.210000_g10619_i0 PRJNA1068513 10665 273 1.21 3.3033 Peptostreptococcus 1257 Bacteria Bacteria 90.1 6.5700000000000005e-21   NR WP_106776846.1 215200 g10619 i0 67.2 3.49450549450549 64 21 70.3 0 256 65 59 122 WP_106776846.1 RidA family protein [Peptostreptococcus russellii] diamond 954 90.1 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Peptostreptococcus Peptostreptococcus russellii
28141397 28141397 PRJNA1068513_S_NODE_10965_length_268_cov_3.200000_g10919_i0 PRJNA1068513 10965 268 3.2 8.576 Eubacteriales bacterium 2831996 Bacteria Bacteria 65.5 2.66e-10   NR MDD5017307.1 2831996 g10919 i0 56.6 1.73507462686567 53 23 59.3 0 203 45 213 265 MDD5017307.1 glucose 1-dehydrogenase [Eubacteriales bacterium] diamond 465 65.5 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Eubacteriales bacterium
28141410 28141410 PRJNA1068513_S_NODE_4285_length_434_cov_10.216066_g4240_i0 PRJNA1068513 4285 434 10.216066 44.33772644 Halalkalibacterium ligniniphilum 1134413 Bacteria Bacteria 45.4 0.0223   NR WP_017726131.1 1134413 g4240 i0 26.7 0.69815668202765 101 66 65 2 334 53 12 111 WP_017726131.1 polyphosphate polymerase domain-containing protein [Halalkalibacterium ligniniphilum] diamond 303 45.4 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Halalkalibacterium (ex Joshi et al. 2022) Halalkalibacterium ligniniphilum
28204096 28204096 PRJNA1068513_S_NODE_10466_length_276_cov_1.349754_g10420_i0 PRJNA1068513 10466 276 1.349754 3.72532104 Massilimicrobiota sp. An134 1965557 Bacteria Bacteria 46.2 0.00259   NR WP_087298137.1 1965557 g10420 i0 39.7 1.43478260869565 68 40 72.8 1 74 274 14 81 WP_087298137.1 ubiquitin-like protein [Massilimicrobiota sp. An134] diamond 396 46.2 1 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Massilimicrobiota Massilimicrobiota sp. An134
29277658 29277658 PRJNA1068513_S_NODE_11829_length_255_cov_2.142857_g11783_i0 PRJNA1068513 11829 255 2.142857 5.46428535 Lachnospira sp. 2049031 Bacteria Bacteria 42.4 0.0126   NR MBE5964096.1 2049031 g11783 i0 48.6 0.411764705882353 35 15 41.2 1 97 201 59 90 MBE5964096.1 hypothetical protein [Lachnospira sp.] diamond 105 42.4 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnospira Lachnospira sp.
29404153 29404153 PRJNA1068513_S_NODE_3149_length_490_cov_1.474820_g3104_i0 PRJNA1068513 3149 490 1.47482 7.226618 Soehngenia longivitae 2562294 Bacteria Bacteria 46.2 0.0237   NR WP_135271281.1 2562294 g3104 i0 30.4 0.563265306122449 92 61 55.7 2 354 82 80 169 WP_135271281.1 dihydrolipoyl dehydrogenase [Soehngenia longivitae] diamond 276 46.2 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Tissierellaceae Soehngenia Soehngenia longivitae
29561850 29561850 PRJNA1068513_S_NODE_2410_length_536_cov_12.485961_g2367_i0 PRJNA1068513 2410 536 12.485961 66.92475096 Brevibacillus fulvus 1125967 Bacteria Bacteria 143 1.08e-40   NR WP_204516782.1 1125967 g2367 i0 61.1 3.20708955223881 113 44 63.2 0 437 99 2 114 WP_204516782.1 group I truncated hemoglobin [Brevibacillus fulvus] diamond 1719 143 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Brevibacillus Brevibacillus fulvus
30952138 30952138 PRJNA1068513_S_NODE_10194_length_280_cov_1.115942_g10148_i0 PRJNA1068513 10194 280 1.115942 3.1246376 Lactobacillus nasalidis 2797258 Bacteria Bacteria 42.4 0.0265   NR WP_280515418.1 2797258 g10148 i0 33.8 0.728571428571429 68 40 70.7 2 4 201 26 90 WP_280515418.1 sigma factor, partial [Lactobacillus nasalidis] diamond 204 42.4 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus nasalidis
31299601 31299601 PRJNA1068513_S_NODE_9635_length_289_cov_2.791667_g9589_i0 PRJNA1068513 9635 289 2.791667 8.06791763 Anaerorhabdus sp. 1872524 Bacteria Bacteria 43.1 0.0487   NR MFV0380139.1 1872524 g9589 i0 42.3 0.539792387543253 52 24 47.8 1 32 169 336 387 MFV0380139.1 FtsK/SpoIIIE domain-containing protein [Anaerorhabdus sp.] diamond 156 43.1 1 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Anaerorhabdus Anaerorhabdus sp.
31679052 31679052 PRJNA1068513_S_NODE_3757_length_459_cov_2.727979_g3712_i0 PRJNA1068513 3757 459 2.727979 12.52142361 Bacilli bacterium 1903720 Bacteria Bacteria 45.1 0.0453   NR MCR5423065.1 1903720 g3712 i0 30.9 0.633986928104575 97 64 61.4 1 415 134 138 234 MCR5423065.1 hypothetical protein [Bacilli bacterium] diamond 291 45.1 1 Bacteria   Bacillati Bacillota Bacilli       Bacilli bacterium
31932120 31932120 PRJNA1068513_S_NODE_7577_length_330_cov_4.568093_g7531_i0 PRJNA1068513 7577 330 4.568093 15.0747069 Clostridium chromiireducens 225345 Bacteria Bacteria 44.3 0.0285   NR WP_079439476.1 225345 g7531 i0 35.6 0.536363636363636 59 37 52.7 1 322 149 135 193 WP_079439476.1 elongation factor G [Clostridium chromiireducens] diamond 177 44.3 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium chromiireducens
32280506 32280506 PRJNA1068513_S_NODE_8659_length_307_cov_4.893162_g8613_i0 PRJNA1068513 8659 307 4.893162 15.02200734 Clostridia bacterium 2044939 Bacteria Bacteria 45.1 0.0114   NR MCI8965784.1 2044939 g8613 i0 52 0.488599348534202 50 24 48.9 0 246 97 65 114 MCI8965784.1 hypothetical protein [Clostridia bacterium] diamond 150 45.1 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;