contig_metadata
14 rows where bioproject = "PRJNA1068513", tax_kingdom = "Bacillati" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 181877 | 181877 | PRJNA1068513_S_NODE_12261_length_251_cov_1.494382_g12215_i0 | PRJNA1068513 | 12261 | 251 | 1.494382 | 3.75089882 | Streptomyces sp. NBC_01497 | 2903885 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|2661748798|gb|CP109427.1| | 2903885 | g12215 | i0 | 100 | 0.111553784860558 | 28 | 0 | 11 | 0 | 83 | 110 | 5557671 | 5557644 | Streptomyces sp. NBC_01497 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_01497 | ||
| 1013636 | 1013636 | PRJNA1068513_S_NODE_5701_length_381_cov_2.649351_g5655_i0 | PRJNA1068513 | 5701 | 381 | 2.649351 | 10.09402731 | Streptomyces | 1883 | Bacteria | Bacteria | 130 | 1.63e-25 | NTclustered | gi|2424005877|gb|CP114203.1| | 1920 | g5655 | i0 | 80.46 | 34.5223097112861 | 174 | 31 | 45 | 3 | 210 | 381 | 9245518 | 9245690 | Streptomyces nigrescens strain DSM 40276 chromosome, complete genome | blastn | 13153 | 130 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces nigrescens | ||
| 12935595 | 12935595 | PRJNA1068513_S_NODE_2291_length_545_cov_5.430085_g2249_i0 | PRJNA1068513 | 2291 | 545 | 5.430085 | 29.59396325 | Micromonospora carbonacea | 47853 | Bacteria | Bacteria | 54.7 | 0.015 | NTclustered | gi|1877131014|gb|CP058905.1| | 47853 | g2249 | i0 | 100 | 0.0532110091743119 | 29 | 0 | 5 | 0 | 333 | 361 | 3037975 | 3037947 | Micromonospora carbonacea strain africana chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Micromonospora | Micromonospora carbonacea | ||
| 15484583 | 15484583 | PRJNA1068513_S_NODE_4193_length_438_cov_8.832877_g4148_i0 | PRJNA1068513 | 4193 | 438 | 8.832877 | 38.68800126 | Actinomycetes | 1760 | Bacteria | Bacteria | 176 | 5.6e-53 | NR | WP_357328706.1 | 58117 | g4148 | i0 | 69.9 | 19.3698630136986 | 123 | 33 | 84.2 | 2 | 2 | 370 | 84 | 202 | WP_357328706.1 adenosylhomocysteinase, partial [Microbispora rosea] | diamond | 8484 | 177 | 0.994350282485876 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Streptosporangiales | Streptosporangiaceae | Microbispora | Microbispora rosea | ||
| 19307472 | 19307472 | PRJNA1068513_S_NODE_4696_length_417_cov_10.267442_g4651_i0 | PRJNA1068513 | 4696 | 417 | 10.267442 | 42.81523314 | Streptomyces sp. NBC_00857 | 2975851 | Bacteria | Bacteria | 58.4 | 8.62e-4 | NTclustered | gi|2655540414|gb|CP108829.1| | 2975851 | g4651 | i0 | 92.5 | 0.0959232613908873 | 40 | 3 | 10 | 0 | 89 | 128 | 2448830 | 2448791 | Streptomyces sp. NBC_00857 chromosome, complete genome | blastn | 40 | 58.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_00857 | ||
| 26592230 | 26592230 | PRJNA1068513_S_NODE_6401_length_361_cov_1.729167_g6355_i0 | PRJNA1068513 | 6401 | 361 | 1.729167 | 6.24229287 | Mycobacterium sp. | 1785 | Bacteria | Bacteria | 42.7 | 0.0442 | NR | WP_325613105.1 | 1785 | g6355 | i0 | 43.9 | 0.340720221606648 | 41 | 23 | 34.1 | 0 | 282 | 160 | 87 | 127 | WP_325613105.1 hypothetical protein [Mycobacterium sp.] | diamond | 123 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium sp. | ||
| 27225151 | 27225151 | PRJNA1068513_S_NODE_11943_length_254_cov_0.983425_g11897_i0 | PRJNA1068513 | 11943 | 254 | 0.983425 | 2.4978995 | Thermoleophilales bacterium | 2760806 | Bacteria | Bacteria | 67 | 8.91e-11 | NR | MEA2444252.1 | 2760806 | g11897 | i0 | 45 | 2.5748031496063 | 80 | 36 | 88.6 | 3 | 252 | 28 | 191 | 267 | MEA2444252.1 malate dehydrogenase [Thermoleophilales bacterium] | diamond | 654 | 67 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Thermoleophilales | Thermoleophilales bacterium | ||||
| 28101045 | 28101045 | PRJNA1068513_S_NODE_6585_length_356_cov_1.713781_g6539_i0 | PRJNA1068513 | 6585 | 356 | 1.713781 | 6.10106036 | Bacteria | 2 | Bacteria | Bacteria | 115 | 2.25e-27 | NR | WP_307326838.1 | 3041785 | g6539 | i0 | 57.3 | 9.70786516853933 | 96 | 41 | 80.9 | 0 | 1 | 288 | 359 | 454 | WP_307326838.1 NAD-dependent succinate-semialdehyde dehydrogenase [Microbacterium sp. SORGH_AS_1204] | diamond | 3456 | 115 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium sp. SORGH_AS_1204 | ||
| 29837652 | 29837652 | PRJNA1068513_S_NODE_4611_length_421_cov_2.100575_g4566_i0 | PRJNA1068513 | 4611 | 421 | 2.100575 | 8.84342075 | root | 1 | Root_unresolved | Root_unresolved | 73.6 | 4.92e-14 | NR | MCE7884015.1 | 2293627 | g4566 | i0 | 46.2 | 4.07600950118765 | 78 | 40 | 54.2 | 2 | 250 | 23 | 3 | 80 | MCE7884015.1 RNA-binding protein [Actinobacteria bacterium ATB1] | diamond | 1716 | 73.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinobacteria bacterium ATB1 | ||||||
| 30067238 | 30067238 | PRJNA1068513_S_NODE_5092_length_402_cov_1.778116_g5047_i0 | PRJNA1068513 | 5092 | 402 | 1.778116 | 7.14802632 | Actinoalloteichus hymeniacidonis | 340345 | Bacteria | Bacteria | 55.1 | 8.05e-6 | NR | WP_069845689.1 | 340345 | g5047 | i0 | 45.2 | 0.462686567164179 | 62 | 30 | 46.3 | 1 | 395 | 210 | 207 | 264 | WP_069845689.1 S49 family peptidase [Actinoalloteichus hymeniacidonis] | diamond | 186 | 55.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Actinoalloteichus | Actinoalloteichus hymeniacidonis | ||
| 30383670 | 30383670 | PRJNA1068513_S_NODE_5273_length_395_cov_4.888199_g5228_i0 | PRJNA1068513 | 5273 | 395 | 4.888199 | 19.30838605 | Kitasatospora sp. NPDC | 1871188 | Bacteria | Bacteria | 84.7 | 3.32e-16 | NR | WP_396608538.1 | 3364059 | g5228 | i0 | 50.8 | 0.493670886075949 | 65 | 32 | 49.4 | 0 | 1 | 195 | 374 | 438 | WP_396608538.1 L-fuconate dehydratase [Kitasatospora sp. NPDC051984] | diamond | 195 | 84.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Kitasatospora | Kitasatospora sp. NPDC051984 | ||
| 31236244 | 31236244 | PRJNA1068513_S_NODE_12875_length_246_cov_1.294798_g12829_i0 | PRJNA1068513 | 12875 | 246 | 1.294798 | 3.18520308 | Solirubrobacterales bacterium | 1909295 | Bacteria | Bacteria | 52.8 | 9.16e-6 | NR | MEZ5122938.1 | 1909295 | g12829 | i0 | 42.4 | 1.03658536585366 | 85 | 44 | 97.6 | 2 | 3 | 242 | 154 | 238 | MEZ5122938.1 aquaporin [Solirubrobacterales bacterium] | diamond | 255 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | Solirubrobacterales bacterium | ||||
| 31868854 | 31868854 | PRJNA1068513_S_NODE_10197_length_280_cov_1.038647_g10151_i0 | PRJNA1068513 | 10197 | 280 | 1.038647 | 2.9082116 | Actinomycetes bacterium | 1883427 | Bacteria | Bacteria | 46.6 | 0.00255 | NR | MCH9729987.1 | 1883427 | g10151 | i0 | 58.8 | 1.45714285714286 | 34 | 14 | 36.4 | 0 | 119 | 220 | 176 | 209 | MCH9729987.1 sensor domain-containing protein [Actinomycetes bacterium] | diamond | 408 | 46.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetes bacterium | |||||
| 32217061 | 32217061 | PRJNA1068513_S_NODE_10698_length_272_cov_3.407035_g10652_i0 | PRJNA1068513 | 10698 | 272 | 3.407035 | 9.2671352 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 64.3 | 1.34e-9 | NR | MEX2394385.1 | 2900548 | g10652 | i0 | 61.7 | 2.17279411764706 | 47 | 17 | 51.8 | 1 | 80 | 220 | 590 | 635 | MEX2394385.1 S9 family peptidase [Actinomycetota bacterium] | diamond | 591 | 64.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;