RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1067443", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1067443 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15484458 15484458 PRJNA1067443_P_NODE_9333_length_289_cov_6.555556_g9315_i0 PRJNA1067443 9333 289 6.555556 18.94555684 Porcine bastrovirus 2588662 Viruses Viruses 52.8 0.027   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g9315 i0 100 0.0968858131487889 28 0 10 0 262 289 41 14 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
23133880 23133880 PRJNA1067443_P_NODE_23939_length_227_cov_2.487013_g23921_i0 PRJNA1067443 23939 227 2.487013 5.64551951 Sopidub virus 3131684 Viruses Viruses 115 2.54e-21   NTclustered gi|2717323145|gb|PP173985.1| 3131684 g23921 i0 93.506 15.4273127753304 77 5 34 0 1 77 2202 2126 MAG: Sopidub virus isolate SP1B_k141_213983 genomic sequence blastn 3502 115 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Sopidub virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;