RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1067443", tax_phylum = "Minisyncoccota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1067443 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1456219 1456219 PRJNA1067443_P_NODE_22_length_1860_cov_17.407387_g19_i0 PRJNA1067443 22 1860 17.407387 323.7773982 Minisyncoccota bacterium 2053589 Bacteria Bacteria 620 7.31e-214   NR HEV8666245.1 2053589 g19 i0 89.5 2.29516129032258 354 37 57.1 0 1065 4 1 354 HEV8666245.1 molecular chaperone DnaK [Candidatus Paceibacterota bacterium] diamond 4269 620 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27415220 27415220 PRJNA1067443_P_NODE_22083_length_242_cov_0.911243_g22065_i0 PRJNA1067443 22083 242 0.911243 2.20520806 Minisyncoccota bacterium 2053589 Bacteria Bacteria 134 6.13e-35   NR MBP6931234.1 2053589 g22065 i0 81.3 4.95867768595041 80 15 99.2 0 2 241 162 241 MBP6931234.1 recombinase family protein [Candidatus Paceibacterota bacterium] diamond 1200 134 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;