RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1067443", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1067443 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28953904 28953904 PRJNA1067443_P_NODE_18908_length_247_cov_0.885057_g18890_i0 PRJNA1067443 18908 247 0.885057 2.18609079 Mucorales 4827 Fungi Fungi 90.5 6.16e-19   NR KAG2193041.1 64648 g18890 i0 66.7 5.08906882591093 60 20 72.9 0 181 2 304 363 KAG2193041.1 hypothetical protein INT47_009291 [Mucor saturninus] diamond 1257 90.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor saturninus
31204261 31204261 PRJNA1067443_P_NODE_515_length_684_cov_14.883797_g498_i0 PRJNA1067443 515 684 14.883797 101.80517148 Ambispora leptoticha 144679 Fungi Fungi 67 5.83e-9   NR CAG8514923.1 144679 g498 i0 29.3 3.83771929824561 215 124 90.4 8 33 650 94 289 CAG8514923.1 3636_t:CDS:2 [Ambispora leptoticha] diamond 2625 67 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Ambisporaceae Ambispora Ambispora leptoticha

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;