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contig_metadata

27 rows where bioproject = "PRJNA1067443" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 27 ✖

bioproject 1

  • PRJNA1067443 · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1456097 1456097 PRJNA1067443_P_NODE_1722_length_492_cov_11.064439_g1704_i0 PRJNA1067443 1722 492 11.064439 54.43703988 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 667 0   NTclustered gi|1624698156|ref|XM_029013946.1| 189622 g1704 i0 91.925 29.7012195121951 483 30 99 8 8 490 501 28 Babesia ovata CTP synthase, putative (BOVATA_050290), partial mRNA blastn 14613 667 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
2288787 2288787 PRJNA1067443_P_NODE_4382_length_371_cov_39.895973_g4364_i0 PRJNA1067443 4382 371 39.895973 148.01405983 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 686 0   NTclustered gi|1409949881|gb|MH542675.1| 88167 g4364 i0 100 98.6469002695418 371 0 100 0 1 371 382 12 Poterioochromonas malhamensis strain SAG933-9 small subunit ribosomal RNA gene, partial sequence blastn 36598 686 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
2288843 2288843 PRJNA1067443_P_NODE_9022_length_292_cov_3.360731_g9004_i0 PRJNA1067443 9022 292 3.360731 9.81333452 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 67.6 9.67e-7   NTclustered gi|2666692166|ref|NC_085525.1| 209404 g9004 i0 87.931 0.585616438356164 58 6 20 1 1 58 7190 7246 Lessonia nigrescens mitochondrion, complete genome blastn 171 67.6 1 Eukaryota Sar     Phaeophyceae Laminariales Lessoniaceae Lessonia Lessonia nigrescens
2732089 2732089 PRJNA1067443_P_NODE_23643_length_231_cov_2.044304_g23625_i0 PRJNA1067443 23643 231 2.044304 4.72234224 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.021   NTclustered gi|2742502725|gb|PP905714.1| 447216 g23625 i0 100 0.242424242424242 28 0 12 0 1 28 1198 1225 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 56 52.8 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides
2732098 2732098 PRJNA1067443_P_NODE_24123_length_221_cov_4.317568_g24105_i0 PRJNA1067443 24123 221 4.317568 9.54182528 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 409 1.0100000000000001e-109   NTclustered gi|859811083|gb|KM818001.1| 88167 g24105 i0 100 103.705882352941 221 0 100 0 1 221 2256 2036 Poterioochromonas malhamensis strain SAG 933.1c 23S ribosomal RNA gene, partial sequence; plastid blastn 22919 409 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
2732124 2732124 PRJNA1067443_P_NODE_3083_length_413_cov_2.850000_g3065_i0 PRJNA1067443 3083 413 2.85 11.7705 Leukarachnion sp. ATCC PRA-24 568390 SAR_Eukaryotes SAR_Eukaryotes 187 1.0399999999999997e-42   NTclustered gi|2727570083|gb|PP760457.1| 568390 g3065 i0 84.536 5.21549636803874 194 25 46 4 121 310 2284 2476 Leukarachnion sp. ATCC PRA-24 culture ATCC:BJ-24B2 mitochondrion, complete genome blastn 2154 187 1 Eukaryota Sar             Leukarachnion sp. ATCC PRA-24
5284403 5284403 PRJNA1067443_P_NODE_3965_length_382_cov_10.964401_g3947_i0 PRJNA1067443 3965 382 10.964401 41.88401182 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.01   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g3947 i0 100 0.369109947643979 29 0 8 0 354 382 38 10 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 141 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
6559223 6559223 PRJNA1067443_P_NODE_11126_length_278_cov_3.434146_g11108_i0 PRJNA1067443 11126 278 3.434146 9.54692588 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.5e-4   NTclustered gi|2742502725|gb|PP905714.1| 447216 g11108 i0 100 0.223021582733813 31 0 11 0 248 278 1228 1198 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 62 58.4 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides
6559450 6559450 PRJNA1067443_P_NODE_22226_length_241_cov_89.875000_g22208_i0 PRJNA1067443 22226 241 89.875 216.59875 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 446 8.519999999999999e-121   NTclustered gi|323690576|gb|GU935635.1| 88167 g22208 i0 100 101.452282157676 241 0 100 0 1 241 2292 2532 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 24450 446 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
6559650 6559650 PRJNA1067443_P_NODE_8526_length_298_cov_3.088889_g8508_i0 PRJNA1067443 8526 298 3.088889 9.20488922 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 545 1.04e-150   NTclustered gi|859811083|gb|KM818001.1| 88167 g8508 i0 99.664 149.577181208054 298 1 100 0 1 298 1952 1655 Poterioochromonas malhamensis strain SAG 933.1c 23S ribosomal RNA gene, partial sequence; plastid blastn 44574 545 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
8666711 8666711 PRJNA1067443_P_NODE_24247_length_209_cov_50.500000_g24229_i0 PRJNA1067443 24247 209 50.5 105.545 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 387 4.42e-103   NTclustered gi|1409222725|gb|MH536659.1| 88167 g24229 i0 100 100 209 0 100 0 1 209 1419 1627 Poterioochromonas malhamensis strain SAG933-1d small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 20900 387 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
8666747 8666747 PRJNA1067443_P_NODE_5707_length_340_cov_38.228464_g5689_i0 PRJNA1067443 5707 340 38.228464 129.9767776 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 556 5.58e-154   NTclustered gi|323690576|gb|GU935635.1| 88167 g5689 i0 100 88.3441176470588 301 0 89 0 1 301 1142 842 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 30037 556 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
9941677 9941677 PRJNA1067443_P_NODE_48_length_1373_cov_25.523077_g44_i0 PRJNA1067443 48 1373 25.523077 350.43184721 Pylaiella littoralis 2885 SAR_Eukaryotes SAR_Eukaryotes 112 4.18e-24   NR NP_150402.1 2885 g44 i0 47.2 0.268754552075747 123 65 26.9 0 196 564 124 246 NP_150402.1 cytochrome c oxidase subunit 3 [Pylaiella littoralis] diamond 369 112 1 Eukaryota Sar     Phaeophyceae Ectocarpales Acinetosporaceae Pylaiella Pylaiella littoralis
11660180 11660180 PRJNA1067443_P_NODE_22910_length_240_cov_2.670659_g22892_i0 PRJNA1067443 22910 240 2.670659 6.4095816 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|258549173|ref|XM_002585402.1| 36329 g22892 i0 100 0.116666666666667 28 0 12 0 53 80 4261 4234 Plasmodium falciparum 3D7 condensin complex subunit 1, putative (PF3D7_1403100), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
12935243 12935243 PRJNA1067443_P_NODE_211_length_877_cov_98.384328_g198_i0 PRJNA1067443 211 877 98.384328 862.83055656 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 1620 0   NTclustered gi|323690576|gb|GU935635.1| 88167 g198 i0 100 94.6271379703535 877 0 100 0 1 877 1160 2036 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 82988 1620 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
13766857 13766857 PRJNA1067443_P_NODE_4671_length_364_cov_12.268041_g4653_i0 PRJNA1067443 4671 364 12.268041 44.65566924 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 141 7.17e-29   NTclustered gi|2248495830|ref|NC_063456.1| 303402 g4653 i0 75.728 11.5137362637363 309 59 82 13 1 300 31884 32185 Nitzschia dissipata isolate Qingdao in China mitochondrion, complete genome blastn 4191 141 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia dissipata
15484039 15484039 PRJNA1067443_P_NODE_11333_length_277_cov_1.759804_g11315_i0 PRJNA1067443 11333 277 1.759804 4.87465708 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 292 1.38e-74   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g11315 i0 86.022 44.1083032490975 279 32 100 6 1 277 3721 3994 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 12218 292 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
16758554 16758554 PRJNA1067443_P_NODE_4114_length_378_cov_3.193443_g4096_i0 PRJNA1067443 4114 378 3.193443 12.07121454 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 699 0   NTclustered gi|2088238071|ref|NC_056910.1| 88167 g4096 i0 100 103.232804232804 378 0 100 0 1 378 14685 15062 Poterioochromonas malhamensis strain SZCZR2049 plastid, complete genome blastn 39022 699 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
19306957 19306957 PRJNA1067443_P_NODE_14416_length_260_cov_1.406417_g14398_i0 PRJNA1067443 14416 260 1.406417 3.6566842 Ochromonas danica 2986 SAR_Eukaryotes SAR_Eukaryotes 464 2.57e-126   NTclustered gi|11465862|ref|NC_002571.1| 2986 g14398 i0 98.846 1 260 3 100 0 1 260 16769 17028 Ochromonas danica mitochondrion, complete genome blastn 260 464 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Ochromonas Ochromonas danica
19307256 19307256 PRJNA1067443_P_NODE_6056_length_335_cov_1.175573_g6038_i0 PRJNA1067443 6056 335 1.175573 3.93816955 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 120 6.549999999999999e-31   NR BBE27972.1 2829 g6038 i0 55.6 16.4238805970149 108 48 96.7 0 334 11 145 252 BBE27972.1 ATP synthase F0 subunit 6 [Heterosigma akashiwo] diamond 5502 121 0.991735537190083 Eukaryota Sar     Raphidophyceae Chattonellales Chattonellaceae Heterosigma Heterosigma akashiwo
20582490 20582490 PRJNA1067443_P_NODE_1357_length_526_cov_14.196468_g1339_i0 PRJNA1067443 1357 526 14.196468 74.67342168 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.014   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g1339 i0 100 0.11787072243346 29 0 6 0 498 526 38 10 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 62 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
20582496 20582496 PRJNA1067443_P_NODE_1377_length_524_cov_3.729490_g1359_i0 PRJNA1067443 1377 524 3.72949 19.5425276 Nannochloropsis limnetica 120807 SAR_Eukaryotes SAR_Eukaryotes 239 3.67e-58   NTclustered gi|1974872445|gb|MT872229.1| 120807 g1359 i0 81.107 60.1679389312977 307 50 58 7 222 524 25379 25077 Nannochloropsis limnetica mitochondrion, complete genome blastn 31528 239 1 Eukaryota Sar     Eustigmatophyceae Eustigmatales Monodopsidaceae Nannochloropsis Nannochloropsis limnetica
21858558 21858558 PRJNA1067443_P_NODE_8658_length_297_cov_1.031250_g8640_i0 PRJNA1067443 8658 297 1.03125 3.0628125 Cafileria marina 2557541 SAR_Eukaryotes SAR_Eukaryotes 148 5.999999999999998e-42   NR YP_009688851.1 2557541 g8640 i0 68.4 0.98989898989899 98 31 99 0 295 2 40 137 YP_009688851.1 cytochrome c oxidase subunit 3 [Cafileria marina] diamond 294 148 1 Eukaryota Sar     Bigyra Bicosoecida   Cafileria Cafileria marina
23133612 23133612 PRJNA1067443_P_NODE_12159_length_272_cov_2.080402_g12141_i0 PRJNA1067443 12159 272 2.080402 5.65869344 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 503 5.729999999999998e-138   NTclustered gi|2088238071|ref|NC_056910.1| 88167 g12141 i0 100 84.7426470588235 272 0 100 0 1 272 15495 15766 Poterioochromonas malhamensis strain SZCZR2049 plastid, complete genome blastn 23050 503 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
26782640 26782640 PRJNA1067443_P_NODE_23921_length_227_cov_2.935065_g23903_i0 PRJNA1067443 23921 227 2.935065 6.66259755 Leukarachnion sp. ATCC PRA-24 568390 SAR_Eukaryotes SAR_Eukaryotes 53.1 6.45e-6   NR XAL83109.1 568390 g23903 i0 46.2 1.74449339207048 65 35 85.9 0 19 213 427 491 XAL83109.1 NADH dehydrogenase subunit 5 [Leukarachnion sp. ATCC PRA-24] diamond 396 53.1 1 Eukaryota Sar             Leukarachnion sp. ATCC PRA-24
26940625 26940625 PRJNA1067443_P_NODE_17782_length_249_cov_0.875000_g17764_i0 PRJNA1067443 17782 249 0.875 2.17875 Symbiodinium necroappetens 1628268 SAR_Eukaryotes SAR_Eukaryotes 60.5 2.27e-8   NR CAE7856609.1 1628268 g17764 i0 43.2 0.975903614457831 81 41 95.2 2 240 4 50 127 CAE7856609.1 unnamed protein product [Symbiodinium necroappetens] diamond 243 60.5 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium necroappetens
32406908 32406908 PRJNA1067443_P_NODE_22939_length_240_cov_2.185629_g22921_i0 PRJNA1067443 22939 240 2.185629 5.2455096 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 74.3 2.76e-13   NR KAJ1431022.1 483371 g22921 i0 63.8 0.725 58 20 71.3 1 1 171 568 625 KAJ1431022.1 hypothetical protein B484DRAFT_44968, partial [Ochromonadaceae sp. CCMP2298] diamond 174 74.3 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;