RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1067443", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA1067443 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27825500 27825500 PRJNA1067443_P_NODE_284_length_809_cov_15.354620_g270_i0 PRJNA1067443 284 809 15.35462 124.2188758 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 360 6.92e-123   NR MBC7998560.1 2052166 g270 i0 87 2.74412855377009 185 24 68.6 0 804 250 54 238 MBC7998560.1 hypothetical protein [Candidatus Melainabacteria bacterium] diamond 2220 360 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
27911489 27911489 PRJNA1067443_P_NODE_22105_length_242_cov_0.911243_g22087_i0 PRJNA1067443 22105 242 0.911243 2.20520806 Bacteria 2 Bacteria Bacteria 56.2 6.38e-7   NR MCA0312712.1 2052166 g22087 i0 44.9 1.8099173553719 78 36 93 3 240 16 57 130 MCA0312712.1 tetratricopeptide repeat protein [Candidatus Melainabacteria bacterium] diamond 438 56.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
31457875 31457875 PRJNA1067443_P_NODE_2536_length_438_cov_12.323288_g2518_i0 PRJNA1067443 2536 438 12.323288 53.97600144 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 225 1.33e-66   NR HIA54118.1 2052166 g2518 i0 79.6 1.95205479452055 142 28 96.6 1 423 1 489 630 HIA54118.1 efflux RND transporter permease subunit [Candidatus Melainabacteria bacterium] diamond 855 225 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;