RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1067443", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Adleribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Adleribacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1067443 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16315881 16315881 PRJNA1067443_P_NODE_173_length_926_cov_17.262603_g160_i0 PRJNA1067443 173 926 17.262603 159.85170378 Bacteria 2 Bacteria Bacteria 221 1.1299999999999999e-68   NR OGC84560.1 1797242 g160 i0 73.7 3.45032397408207 152 39 48.9 1 474 926 5 156 OGC84560.1 MAG: translation initiation factor IF-3 [Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_12_FULL_53_18] diamond 3195 221 1 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_12_FULL_53_18
31647362 31647362 PRJNA1067443_P_NODE_1217_length_543_cov_4.997872_g1199_i0 PRJNA1067443 1217 543 4.997872 27.13844496 Candidatus Adlerbacteria bacterium 1932010 Bacteria Bacteria 150 8.93e-40   NR MDB5224618.1 1932010 g1199 i0 50.9 0.900552486187845 163 77 88.4 1 30 509 224 386 MDB5224618.1 hypothetical protein [Candidatus Adlerbacteria bacterium] diamond 489 150 1 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium
32113788 32113788 PRJNA1067443_P_NODE_1698_length_494_cov_6.334917_g1680_i0 PRJNA1067443 1698 494 6.334917 31.29448998 Bacteria 2 Bacteria Bacteria 136 5.19e-38   NR KKW35481.1 1618605 g1680 i0 83.1 2.03441295546559 83 10 50.4 1 489 241 40 118 KKW35481.1 MAG: hypothetical protein UY83_C0007G0005 [Candidatus Adlerbacteria bacterium GW2011_GWA1_54_10] diamond 1005 137 0.992700729927007 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium GW2011_GWA1_54_10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;