RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1067370", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

  • Thermoproteota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1067370 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2731784 2731784 PRJNA1067370_S_NODE_7203_length_221_cov_52.439189_g7177_i0 PRJNA1067370 7203 221 52.439189 115.89060769 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.02   NTclustered gi|323706731|gb|CP002529.1| 985053 g7177 i0 100 0.126696832579186 28 0 13 0 173 200 336100 336127 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
23133557 23133557 PRJNA1067370_S_NODE_5999_length_245_cov_5.098837_g5973_i0 PRJNA1067370 5999 245 5.098837 12.49215065 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.022   NTclustered gi|323706731|gb|CP002529.1| 985053 g5973 i0 100 0.114285714285714 28 0 11 0 143 170 336100 336127 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
28267191 28267191 PRJNA1067370_P_NODE_75326_length_257_cov_0.951087_g74777_i0 PRJNA1067370 75326 257 0.951087 2.44429359 Thermofilaceae archaeon 2268203 Archaea Archaea 86.3 1.59e-17   NR MEM2592699.1 2268203 g74777 i0 42.9 1.96108949416342 84 48 98.1 0 6 257 276 359 MEM2592699.1 DUF1116 domain-containing protein [Thermofilaceae archaeon] diamond 504 86.3 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermofilales Thermofilaceae   Thermofilaceae archaeon
31267975 31267975 PRJNA1067370_P_NODE_80595_length_251_cov_0.865169_g80046_i0 PRJNA1067370 80595 251 0.865169 2.17157419 Thermoproteota archaeon 2056631 Archaea Archaea 85.9 1.29e-19   NR MDQ4072896.1 2056631 g80046 i0 63.2 0.681274900398406 57 21 68.1 0 173 3 20 76 MDQ4072896.1 hypothetical protein [Thermoproteota archaeon] diamond 171 85.9 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;