contig_metadata
21 rows where bioproject = "PRJNA1067370" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4007376 | 4007376 | PRJNA1067370_P_NODE_49364_length_298_cov_1.244444_g48816_i0 | PRJNA1067370 | 49364 | 298 | 1.244444 | 3.70844312 | Maridesulfovibrio sp. | 2795000 | Bacteria | Bacteria | 422 | 1.83e-113 | NTclustered | gi|2621785158|emb|OY781616.1| | 2795000 | g48816 | i0 | 92.282 | 290.852348993289 | 298 | 21 | 99 | 2 | 1 | 297 | 627482 | 627186 | MAG: Maridesulfovibrio sp. isolate 7570950b-8a73-422e-b528-09704edcd613 genome assembly, chromosome: 1 | blastn | 86674 | 422 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Maridesulfovibrio | Maridesulfovibrio sp. | ||
| 5283867 | 5283867 | PRJNA1067370_P_NODE_74245_length_258_cov_1.664865_g73696_i0 | PRJNA1067370 | 74245 | 258 | 1.664865 | 4.2953517 | Desulfovibrio mangrovi | 2976983 | Bacteria | Bacteria | 398 | 2.62e-106 | NTclustered | gi|2330538096|gb|CP104208.1| | 2976983 | g73696 | i0 | 97.826 | 230.562015503876 | 230 | 5 | 89 | 0 | 29 | 258 | 1675691 | 1675920 | Desulfovibrio mangrovi strain FT415 chromosome, complete genome | blastn | 59485 | 398 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio mangrovi | ||
| 7390864 | 7390864 | PRJNA1067370_P_NODE_107766_length_243_cov_0.905882_g107217_i0 | PRJNA1067370 | 107766 | 243 | 0.905882 | 2.20129326 | Geobacter | 28231 | Bacteria | Bacteria | 272 | 1.5399999999999998e-68 | NTclustered | gi|779731694|gb|CP010430.1| | 35554 | g107217 | i0 | 86.831 | 357.777777777778 | 243 | 32 | 100 | 0 | 1 | 243 | 2784467 | 2784709 | Geobacter sulfurreducens strain AM-1 genome | blastn | 86940 | 272 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sulfurreducens | ||
| 11659295 | 11659295 | PRJNA1067370_P_NODE_19630_length_423_cov_3.988571_g19082_i0 | PRJNA1067370 | 19630 | 423 | 3.988571 | 16.87165533 | Desulfuromonas acetoxidans | 891 | Bacteria | Bacteria | 351 | 3.59e-92 | NTclustered | gi|662020026|ref|NR_121913.1| | 891 | g19082 | i0 | 83.206 | 187.730496453901 | 393 | 56 | 91 | 9 | 37 | 423 | 1218 | 830 | Desulfuromonas acetoxidans strain DSM 684 23S ribosomal RNA gene, complete sequence | blastn | 79410 | 351 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Desulfuromonas | Desulfuromonas acetoxidans | ||
| 25239470 | 25239470 | PRJNA1067370_P_NODE_16180_length_461_cov_2.141753_g15632_i0 | PRJNA1067370 | 16180 | 461 | 2.141753 | 9.87348133 | Pseudodesulfovibrio | 2035811 | Bacteria | Bacteria | 545 | 1.68e-150 | NTclustered | gi|485099208|ref|NR_102600.1| | 879567 | g15632 | i0 | 88.121 | 446.1431670282 | 463 | 49 | 99 | 4 | 1 | 459 | 1339 | 1799 | Desulfovibrio piezophilus strain C1TLV30 23S ribosomal RNA gene, complete sequence | blastn | 205672 | 545 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Pseudodesulfovibrio | Pseudodesulfovibrio piezophilus | ||
| 26592127 | 26592127 | PRJNA1067370_P_NODE_4561_length_821_cov_2.030749_g4081_i0 | PRJNA1067370 | 4561 | 821 | 2.030749 | 16.67244929 | Desulfovibrio cuneatus | 159728 | Bacteria | Bacteria | 78.2 | 1.9e-13 | NR | WP_051258216.1 | 159728 | g4081 | i0 | 47.4 | 0.416565164433618 | 114 | 55 | 40.2 | 2 | 352 | 23 | 2 | 114 | WP_051258216.1 pesticin C-terminus-like muramidase [Desulfovibrio cuneatus] | diamond | 342 | 78.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio cuneatus | ||
| 27856855 | 27856855 | PRJNA1067370_P_NODE_81085_length_251_cov_0.865169_g80536_i0 | PRJNA1067370 | 81085 | 251 | 0.865169 | 2.17157419 | Pseudodesulfovibrio sediminis | 2810563 | Bacteria | Bacteria | 61.2 | 4.36e-10 | NR | WP_229591809.1 | 2810563 | g80536 | i0 | 66.7 | 0.466135458167331 | 39 | 13 | 46.6 | 0 | 117 | 1 | 1 | 39 | WP_229591809.1 RNA recognition motif domain-containing protein [Pseudodesulfovibrio sediminis] | diamond | 117 | 61.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Pseudodesulfovibrio | Pseudodesulfovibrio sediminis | ||
| 28709616 | 28709616 | PRJNA1067370_P_NODE_95467_length_246_cov_2.722543_g94918_i0 | PRJNA1067370 | 95467 | 246 | 2.722543 | 6.69745578 | Syntrophobacteraceae bacterium | 2052185 | Bacteria | Bacteria | 42 | 0.0368 | NR | HYA43157.1 | 2052185 | g94918 | i0 | 34.4 | 0.74390243902439 | 61 | 38 | 74.4 | 1 | 238 | 56 | 23 | 81 | HYA43157.1 potassium channel family protein [Syntrophobacteraceae bacterium] | diamond | 183 | 42 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophobacteria | Syntrophobacterales | Syntrophobacteraceae | Syntrophobacteraceae bacterium | |||
| 29246162 | 29246162 | PRJNA1067370_P_NODE_53809_length_289_cov_1.407407_g53260_i0 | PRJNA1067370 | 53809 | 289 | 1.407407 | 4.06740623 | Syntrophobacterales bacterium | 2282155 | Bacteria | Bacteria | 149 | 1.81e-41 | NR | MEJ2092418.1 | 2282155 | g53260 | i0 | 74 | 1.99307958477509 | 96 | 25 | 99.7 | 0 | 2 | 289 | 92 | 187 | MEJ2092418.1 glycosyltransferase family 2 protein [Syntrophobacterales bacterium] | diamond | 576 | 149 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophobacteria | Syntrophobacterales | Syntrophobacterales bacterium | ||||
| 29404070 | 29404070 | PRJNA1067370_P_NODE_53909_length_289_cov_1.268519_g53360_i0 | PRJNA1067370 | 53909 | 289 | 1.268519 | 3.66601991 | Desulfobacterales bacterium | 2044940 | Bacteria | Bacteria | 46.2 | 7.62e-4 | NR | MCG8553506.1 | 2044940 | g53360 | i0 | 27.6 | 1.01730103806228 | 98 | 67 | 97.6 | 1 | 284 | 3 | 8 | 105 | MCG8553506.1 hypothetical protein [Desulfobacterales bacterium] | diamond | 294 | 46.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium | ||||
| 29435224 | 29435224 | PRJNA1067370_P_NODE_102670_length_244_cov_1.350877_g102121_i0 | PRJNA1067370 | 102670 | 244 | 1.350877 | 3.29613988 | Desulfobulbaceae bacterium | 2053307 | Bacteria | Bacteria | 47.4 | 8.94e-4 | NR | MCB2182907.1 | 2053307 | g102121 | i0 | 56.8 | 0.959016393442623 | 37 | 16 | 45.5 | 0 | 141 | 31 | 14 | 50 | MCB2182907.1 glutamine synthetase III [Desulfobulbaceae bacterium] | diamond | 234 | 47.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbaceae bacterium | |||
| 30090312 | 30090312 | PRJNA1067370_P_NODE_19872_length_421_cov_2.212644_g19324_i0 | PRJNA1067370 | 19872 | 421 | 2.212644 | 9.31523124 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 96.3 | 3.4800000000000006e-21 | NR | WP_321495025.1 | 240139 | g19324 | i0 | 47 | 5.07363420427553 | 115 | 54 | 79.8 | 2 | 75 | 410 | 61 | 171 | WP_321495025.1 DUF4197 domain-containing protein [uncultured Desulfobacter sp.] | diamond | 2136 | 96.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacter | uncultured Desulfobacter sp. | ||
| 30098677 | 30098677 | PRJNA1067370_P_NODE_37792_length_326_cov_1.217391_g37244_i0 | PRJNA1067370 | 37792 | 326 | 1.217391 | 3.96869466 | Candidatus Electronema halotolerans | 3036122 | Bacteria | Bacteria | 68.6 | 8.54e-11 | NR | CAK8714776.1 | 3036122 | g37244 | i0 | 37.9 | 0.947852760736196 | 103 | 52 | 89.3 | 3 | 325 | 35 | 112 | 208 | CAK8714776.1 hypothetical protein GCAAIG_04140 [Candidatus Electronema halotolerans] | diamond | 309 | 68.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Candidatus Electronema | Candidatus Electronema halotolerans | ||
| 30375268 | 30375268 | PRJNA1067370_P_NODE_23132_length_395_cov_1.630435_g22584_i0 | PRJNA1067370 | 23132 | 395 | 1.630435 | 6.44021825 | Bacteria | 2 | Bacteria | Bacteria | 112 | 6.79e-27 | NR | MBI4962568.1 | 2358 | g22584 | i0 | 46.4 | 2.58227848101266 | 112 | 59 | 84.3 | 1 | 49 | 381 | 5 | 116 | MBI4962568.1 Tat pathway signal protein [Desulfomonile tiedjei] | diamond | 1020 | 113 | 0.991150442477876 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfomonilia | Desulfomonilales | Desulfomonilaceae | Desulfomonile | Desulfomonile tiedjei | ||
| 30572559 | 30572559 | PRJNA1067370_P_NODE_97953_length_246_cov_0.890173_g97404_i0 | PRJNA1067370 | 97953 | 246 | 0.890173 | 2.18982558 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 43.1 | 0.00565 | NR | MFQ5843315.1 | 2202153 | g97404 | i0 | 31 | 0.707317073170732 | 58 | 36 | 65.9 | 2 | 38 | 199 | 4 | 61 | MFQ5843315.1 hypothetical protein [Thermodesulfobacteriota bacterium] | diamond | 174 | 43.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 31109644 | 31109644 | PRJNA1067370_P_NODE_111395_length_242_cov_0.911243_g110846_i0 | PRJNA1067370 | 111395 | 242 | 0.911243 | 2.20520806 | Maridesulfovibrio hydrothermalis | 191026 | Bacteria | Bacteria | 45.4 | 0.00418 | NR | WP_015337732.1 | 191026 | g110846 | i0 | 38.8 | 0.607438016528926 | 49 | 29 | 60.7 | 1 | 237 | 91 | 316 | 363 | WP_015337732.1 PAS domain-containing sensor histidine kinase [Maridesulfovibrio hydrothermalis] | diamond | 147 | 45.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Maridesulfovibrio | Maridesulfovibrio hydrothermalis | ||
| 31204119 | 31204119 | PRJNA1067370_P_NODE_111695_length_242_cov_0.911243_g111146_i0 | PRJNA1067370 | 111695 | 242 | 0.911243 | 2.20520806 | Desulfogranum marinum | 453220 | Bacteria | Bacteria | 108 | 3.4e-25 | NR | WP_232370840.1 | 453220 | g111146 | i0 | 69.6 | 2.76446280991736 | 69 | 16 | 85.5 | 1 | 27 | 233 | 273 | 336 | WP_232370840.1 5-histidylcysteine sulfoxide synthase [Desulfogranum marinum] | diamond | 669 | 108 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfogranum | Desulfogranum marinum | ||
| 31584443 | 31584443 | PRJNA1067370_P_NODE_79796_length_251_cov_0.865169_g79247_i0 | PRJNA1067370 | 79796 | 251 | 0.865169 | 2.17157419 | Smithella sp. | 2053614 | Bacteria | Bacteria | 50.4 | 7.38e-5 | NR | MEN6620309.1 | 2053614 | g79247 | i0 | 44.8 | 0.693227091633466 | 58 | 32 | 69.3 | 0 | 182 | 9 | 36 | 93 | MEN6620309.1 ankyrin repeat domain-containing protein [Smithella sp.] | diamond | 174 | 50.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Smithellaceae | Smithella | Smithella sp. | ||
| 31900452 | 31900452 | PRJNA1067370_P_NODE_100217_length_245_cov_0.895349_g99668_i0 | PRJNA1067370 | 100217 | 245 | 0.895349 | 2.19360505 | Desulfosarcina sp. BuS5 | 933262 | Bacteria | Bacteria | 90.1 | 4.55e-19 | NR | WP_035266092.1 | 933262 | g99668 | i0 | 53.2 | 0.96734693877551 | 79 | 36 | 95.5 | 1 | 9 | 242 | 23 | 101 | WP_035266092.1 RNA-guided endonuclease InsQ/TnpB family protein [Desulfosarcina sp. BuS5] | diamond | 237 | 90.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosarcinaceae | Desulfosarcina | Desulfosarcina sp. BuS5 | ||
| 32050372 | 32050372 | PRJNA1067370_P_NODE_97238_length_246_cov_0.890173_g96689_i0 | PRJNA1067370 | 97238 | 246 | 0.890173 | 2.18982558 | root | 1 | Root_unresolved | Root_unresolved | 58.2 | 2.12e-8 | NR | TES90568.1 | 2049433 | g96689 | i0 | 38.5 | 5.29268292682927 | 78 | 46 | 95.1 | 2 | 244 | 11 | 52 | 127 | TES90568.1 MAG: ester cyclase [Desulfobacteraceae bacterium] | diamond | 1302 | 58.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacteraceae bacterium | |||
| 32216998 | 32216998 | PRJNA1067370_P_NODE_58278_length_282_cov_1.861244_g57729_i0 | PRJNA1067370 | 58278 | 282 | 1.861244 | 5.24870808 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 156 | 1.15e-45 | NR | GJM17674.1 | 2202153 | g57729 | i0 | 90.5 | 1.8936170212766 | 84 | 8 | 89.4 | 0 | 29 | 280 | 7 | 90 | GJM17674.1 MAG: hypothetical protein DHS20C13_30010 [Thermodesulfobacteriota bacterium] | diamond | 534 | 156 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;