RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1067370" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1067370 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27762388 27762388 PRJNA1067370_P_NODE_117344_length_228_cov_3.870968_g116795_i0 PRJNA1067370 117344 228 3.870968 8.82580704 Hangzhou cletus punctiger lispivirus 1 2905566 Viruses Viruses 68.2 3.27e-11   NR YP_010805220.1 2905566 g116795 i0 62.5 0.631578947368421 48 18 63.2 0 9 152 262 309 YP_010805220.1 MAG: hypothetical protein QKV05_gp3 [Hangzhou cletus punctiger lispivirus 1] diamond 144 68.2 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Hemipvirus Hemipvirus veri
31742173 31742173 PRJNA1067370_P_NODE_117877_length_223_cov_10.586667_g117328_i0 PRJNA1067370 117877 223 10.586667 23.60826741 Halyomorpha halys orthomyxo-like virus 1 2950333 Viruses Viruses 102 2.0899999999999994e-23   NR URQ09140.1 2950333 g117328 i0 62.7 1.00896860986547 75 26 98.2 1 5 223 470 544 URQ09140.1 replicase PB2 [Halyomorpha halys orthomyxo-like virus 1] diamond 225 102 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Halyomorpha halys orthomyxo-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;