RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1067370" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1067370 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28732707 28732707 PRJNA1067370_P_NODE_74247_length_258_cov_1.664865_g73698_i0 PRJNA1067370 74247 258 1.664865 4.2953517 Bacteria 2 Bacteria Bacteria 80.5 1.25e-15   NR OGV44978.1 1798576 g73698 i0 50 7.25581395348837 78 37 90.7 1 234 1 1 76 OGV44978.1 MAG: hydroxyacid dehydrogenase [Lentisphaerae bacterium GWF2_57_35] diamond 1872 81.3 0.990159901599016 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium GWF2_57_35
28993839 28993839 PRJNA1067370_P_NODE_2628_length_1046_cov_1.784173_g2243_i0 PRJNA1067370 2628 1046 1.784173 18.66244958 Lentisphaerota bacterium 1932692 Bacteria Bacteria 70.1 1.26e-9   NR MBE6375617.1 1932692 g2243 i0 37.3 0.65678776290631 102 63 29 1 336 638 134 235 MBE6375617.1 ankyrin repeat domain-containing protein [Lentisphaerota bacterium] diamond 687 70.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;