RNAquarium Metadata Server
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contig_metadata

19 rows where bioproject = "PRJNA1067370" and tax_phylum = "Kitrinoviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 19 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1067370 · 19 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
181210 181210 PRJNA1067370_P_NODE_861_length_1585_cov_1.854497_g657_i0 PRJNA1067370 861 1585 1.854497 29.39377745 Carlavirus chloroipomoeae 3427748 Viruses Viruses 2492 0   NTclustered gi|2512663715|gb|OQ139537.1| 263004 g657 i0 95.127 13.7129337539432 1580 77 99 0 1 1580 1924 3503 Sweet potato chlorotic fleck virus isolate CFV-SD1, complete genome blastn 21735 2492 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
1455395 1455395 PRJNA1067370_P_NODE_20822_length_413_cov_0.900000_g20274_i0 PRJNA1067370 20822 413 0.9 3.717 Carlavirus chloroipomoeae 3427748 Viruses Viruses 625 1.8699999999999995e-174   NTclustered gi|930624036|gb|KR072674.1| 1718190 g20274 i0 93.947 2.99757869249395 413 25 100 0 1 413 3963 3551 Sweet potato yellow mottle virus, complete genome blastn 1238 625 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
1455478 1455478 PRJNA1067370_P_NODE_30282_length_354_cov_1.505338_g29734_i0 PRJNA1067370 30282 354 1.505338 5.32889652 Carlavirus chloroipomoeae 3427748 Viruses Viruses 520 7.639999999999999e-143   NTclustered gi|930624036|gb|KR072674.1| 1718190 g29734 i0 93.22 3.94915254237288 354 22 99 2 2 354 3252 2900 Sweet potato yellow mottle virus, complete genome blastn 1398 520 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
2731503 2731503 PRJNA1067370_P_NODE_61903_length_277_cov_1.181373_g61354_i0 PRJNA1067370 61903 277 1.181373 3.27240321 Carlavirus chloroipomoeae 3427748 Viruses Viruses 429 1.0099999999999999e-115   NTclustered gi|930624036|gb|KR072674.1| 1718190 g61354 i0 94.585 3.99638989169675 277 15 100 0 1 277 5156 5432 Sweet potato yellow mottle virus, complete genome blastn 1107 429 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
4007180 4007180 PRJNA1067370_P_NODE_22844_length_397_cov_2.478395_g22296_i0 PRJNA1067370 22844 397 2.478395 9.83922815 Carlavirus chloroipomoeae 3427748 Viruses Viruses 678 0   NTclustered gi|2512663715|gb|OQ139537.1| 263004 g22296 i0 97.481 18.9773299748111 397 10 100 0 1 397 28 424 Sweet potato chlorotic fleck virus isolate CFV-SD1, complete genome blastn 7534 678 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
4007265 4007265 PRJNA1067370_P_NODE_33444_length_341_cov_2.044776_g32896_i0 PRJNA1067370 33444 341 2.044776 6.97268616 Carlavirus chloroipomoeae 3427748 Viruses Viruses 575 1.5499999999999994e-159   NTclustered gi|2512663715|gb|OQ139537.1| 263004 g32896 i0 97.067 11.0029325513196 341 10 100 0 1 341 436 776 Sweet potato chlorotic fleck virus isolate CFV-SD1, complete genome blastn 3752 575 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
5283835 5283835 PRJNA1067370_P_NODE_68145_length_267_cov_2.159794_g67596_i0 PRJNA1067370 68145 267 2.159794 5.76664998 Carlavirus chloroipomoeae 3427748 Viruses Viruses 388 1.64e-103   NTclustered gi|930624036|gb|KR072674.1| 1718190 g67596 i0 92.884 5.96629213483146 267 19 100 0 1 267 6788 6522 Sweet potato yellow mottle virus, complete genome blastn 1593 388 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
6558578 6558578 PRJNA1067370_P_NODE_1646_length_1261_cov_4.066498_g1353_i0 PRJNA1067370 1646 1261 4.066498 51.27853978 Hepelivirales sp. 2809460 Viruses Viruses 793 0   NTclustered gi|2416689812|gb|OP699083.1| 2809460 g1353 i0 80.246 0.839016653449643 1058 205 84 4 206 1261 1067 12 Hepelivirales sp. strain MR644-18E/5050 nonstructural polyprotein gene, partial cds blastn 1058 793 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales     Hepelivirales sp.
6559037 6559037 PRJNA1067370_P_NODE_826_length_1612_cov_3.637427_g631_i0 PRJNA1067370 826 1612 3.637427 58.63532324 Carlavirus chloroipomoeae 3427748 Viruses Viruses 2684 0   NTclustered gi|2512663715|gb|OQ139537.1| 263004 g631 i0 96.712 46.2382133995037 1612 53 100 0 1 1612 7472 9083 Sweet potato chlorotic fleck virus isolate CFV-SD1, complete genome blastn 74536 2684 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
10383994 10383994 PRJNA1067370_P_NODE_21789_length_405_cov_1.692771_g21241_i0 PRJNA1067370 21789 405 1.692771 6.85572255 Carlavirus chloroipomoeae 3427748 Viruses Viruses 536 8.799999999999998e-148   NTclustered gi|930624036|gb|KR072674.1| 1718190 g21241 i0 90.617 4.6962962962963 405 36 99 2 1 404 2469 2872 Sweet potato yellow mottle virus, complete genome blastn 1902 536 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
12934451 12934451 PRJNA1067370_P_NODE_21931_length_404_cov_1.531722_g21383_i0 PRJNA1067370 21931 404 1.531722 6.18815688 Carlavirus chloroipomoeae 3427748 Viruses Viruses 610 5.0999999999999976e-170   NTclustered gi|930624036|gb|KR072674.1| 1718190 g21383 i0 94.03 5.9480198019802 402 24 99 0 3 404 6513 6112 Sweet potato yellow mottle virus, complete genome blastn 2403 610 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
14209367 14209367 PRJNA1067370_P_NODE_152_length_2988_cov_2.581818_g90_i0 PRJNA1067370 152 2988 2.581818 77.14472184 Carlavirus chloroipomoeae 3427748 Viruses Viruses 5073 0   NTclustered gi|2512663715|gb|OQ139537.1| 263004 g90 i0 97.323 17.0619143239625 2988 79 100 1 1 2988 4518 7504 Sweet potato chlorotic fleck virus isolate CFV-SD1, complete genome blastn 50981 5073 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
18032738 18032738 PRJNA1067370_P_NODE_6495_length_698_cov_1.388800_g5985_i0 PRJNA1067370 6495 698 1.3888 9.693824 Carlavirus chloroipomoeae 3427748 Viruses Viruses 1116 0   NTclustered gi|930624036|gb|KR072674.1| 1718190 g5985 i0 95.552 5.97421203438395 697 31 99 0 2 698 6911 7607 Sweet potato yellow mottle virus, complete genome blastn 4170 1116 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
19306300 19306300 PRJNA1067370_P_NODE_16116_length_462_cov_1.624679_g15568_i0 PRJNA1067370 16116 462 1.624679 7.50601698 Carlavirus chloroipomoeae 3427748 Viruses Viruses 767 0   NTclustered gi|2512663715|gb|OQ139537.1| 263004 g15568 i0 96.739 13.969696969697 460 15 99 0 3 462 1231 1690 Sweet potato chlorotic fleck virus isolate CFV-SD1, complete genome blastn 6454 767 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
19306507 19306507 PRJNA1067370_P_NODE_45576_length_308_cov_1.217021_g45028_i0 PRJNA1067370 45576 308 1.217021 3.74842468 Carlavirus chloroipomoeae 3427748 Viruses Viruses 507 5.0999999999999996e-139   NTclustered gi|2512663715|gb|OQ139537.1| 263004 g45028 i0 96.417 9.89935064935065 307 11 99 0 2 308 826 1132 Sweet potato chlorotic fleck virus isolate CFV-SD1, complete genome blastn 3049 507 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
20581934 20581934 PRJNA1067370_P_NODE_32457_length_345_cov_1.830882_g31909_i0 PRJNA1067370 32457 345 1.830882 6.3165429 Chrocomolt virus 3129476 Viruses Viruses 429 1.29e-115   NTclustered gi|2717317674|gb|PP171924.1| 3129476 g31909 i0 95.203 28.2347826086957 271 13 79 0 1 271 4130 4400 MAG: Chrocomolt virus isolate CC1B_k141_48525 genomic sequence blastn 9741 429 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Chrocomolt virus
20582007 20582007 PRJNA1067370_P_NODE_4417_length_834_cov_1.950066_g3944_i0 PRJNA1067370 4417 834 1.950066 16.26355044 Carlavirus chloroipomoeae 3427748 Viruses Viruses 1391 0   NTclustered gi|2512663715|gb|OQ139537.1| 263004 g3944 i0 96.763 11.0011990407674 834 27 100 0 1 834 4524 3691 Sweet potato chlorotic fleck virus isolate CFV-SD1, complete genome blastn 9175 1391 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
24406803 24406803 PRJNA1067370_P_NODE_4500_length_826_cov_1.940239_g4023_i0 PRJNA1067370 4500 826 1.940239 16.02637414 Carlavirus chloroipomoeae 3427748 Viruses Viruses 1304 0   NTclustered gi|930624036|gb|KR072674.1| 1718190 g4023 i0 95.157 11.7130750605327 826 40 100 0 1 826 8924 8099 Sweet potato yellow mottle virus, complete genome blastn 9675 1304 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus chloroipomoeae
29814375 29814375 PRJNA1067370_P_NODE_31_length_6458_cov_5.867659_g7_i0 PRJNA1067370 31 6458 5.867659 378.93341822 Hepelivirales sp. 2809460 Viruses Viruses 997 0   NR WAY16397.1 2809460 g7 i0 93.3 0.24852895633323 535 36 24.9 0 4445 2841 1 535 WAY16397.1 nonstructural polyprotein, partial [Hepelivirales sp.] diamond 1605 997 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales     Hepelivirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;